PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG000920.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 273aa MW: 29272.4 Da PI: 10.2181

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG000920.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.6	3.3e-19	25	69	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+W++eEd llv +v+q+G ++W+ I++ ++ gRt+k+c++rw + TRIDC4AG000920.1 25 GSWSPEEDALLVALVRQHGARRWSVISASVP-GRTGKSCRLRWCNQ 69 89***************************.*********985 PP
2	Myb_DNA-binding	50.5	4.7e-16	78	120	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T +Ed l++ a +++G++ W+ Iar ++ gRt++++k++w++ TRIDC4AG000920.1 78 PFTVQEDALIIAAQARYGNK-WADIARLLP-GRTDNSVKNHWNSN 120 89****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MIPAIACVGY DRTDAMEVPS PIKTGSWSPE EDALLVALVR QHGARRWSVI SASVPGRTGK 60 SCRLRWCNQL SPAVQHRPFT VQEDALIIAA QARYGNKWAD IARLLPGRTD NSVKNHWNSN 120 LRRCQRRAKA MAAATATRVA ASSSSSGSAV RAKMQQEEQV MVMNGSPPAV AHGAVTAIID 180 DPMPMLSLTL SLGLPQMAVD KASEEAKAKA KEKTPPPVGV GGNDVRLMAA IRQVVREEVE 240 RQAGQLLYSV VMATTAARVD GASSSDHPTN GHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	2e-49	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG000920.1