PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG000860.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 314aa    MW: 33768.7 Da    PI: 5.2877
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG000860.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.9e-19103150455
               AP2   4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +G+r+++ +g+W+AeIrdp     + +r++lg+f+ta++Aa+a++ a+++l+g
  TRIDC4AG000860.2 103 HGIRQRP-WGKWAAEIRDPH----KgTRVWLGTFDTADDAARAYDVAARRLRG 150
                       6******.**********72....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MCGGAILAEL IPPSAGRASK QVAAGRASPK KAGKSKGHRY GSVADVDDFE AAFENFDDDL  60
DLQAEEDGDE HVVFASKPAF SPAYDDGRAA QAASKKKSVR PLHGIRQRPW GKWAAEIRDP  120
HKGTRVWLGT FDTADDAARA YDVAARRLRG SKAKVNFPDA ARAGARPRRA SRRTAQKPQR  180
PPARTTAYSA TAAPRARPEQ DAMMVKPERM EFSDVDAFVD LTAAVAVLPP VTASSFADKM  240
PRVDEDSSEG SGGGSMLGFA DDLGFDPFMM LQYESMDSLF AGDAVIQDAR GVDGGMDGVS  300
LWSFEEFPMD SAIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.31e-19ERF family protein