PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG000810.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 336aa    MW: 35647.4 Da    PI: 4.3835
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG000810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91.1e-1796145255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp+    +  r++lg+f +ae Aa a++ a+++++g
  TRIDC4AG000810.1  96 QYRGVRRRP-WGKWAAEIRDPV----KgVRVWLGTFPSAEAAALAYDGAARAIRG 145
                       69*******.**********75....44************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MCGGAILAEL IPGGAPARRA ASGHVWPGKG VKQPKAADDF EAAFRDFNEE EDVVVVVEEE  60
VAESKPFVFA ASPKKPQQQR GEEEQAAPAR RRKPAQYRGV RRRPWGKWAA EIRDPVKGVR  120
VWLGTFPSAE AAALAYDGAA RAIRGPRAKL NFPPSSAVAA AAPGSRKRVR AEALAAPAAK  180
PAPVVTLVDD EEEHASSLFV KHEAEPSEGS ESSGALPDFS WQGMSALDEA PAYPAPEPET  240
EQLTKRARTT EAEDIDEGMS AHPASDSDSD ALFDALLFAD QFAYFNGGAY ESLDSLFSAD  300
AVQSGATATA AAADEAGLGL WSFDDDCLVD ECSLSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
191103RRKPAQYRGVRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.26e-19ERF family protein