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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC4AG000590.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | B3 | ||||||||
| Protein Properties | Length: 271aa MW: 30024.3 Da PI: 9.1161 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 51.5 | 1.8e-16 | 170 | 260 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
f k +++s+v + +l lp +f++++ k ++ t+tl de+ +++e k+ ++++ l++GW +F+ ++ +++gD+ vF+l++ ++f +
TRIDC4AG000590.1 170 FMKRMLHSHVVRGFWLGLPSHFCDTYLPK--NDCTITLVDEKDEEFESKY--LAYKKG--LSGGWAGFALDHVIRDGDSTVFQLIKPTTF--K 254
8999********************99533..4459***************..555555..9***********************986777..9 PP
EEEE-S CS
B3 94 vkvfrk 99
v+++r+
TRIDC4AG000590.1 255 VHIIRA 260
999885 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 271 aa Download sequence |
NIPPPPPPRN PIPPPPAAAP GSRCAAAMAI EKKGMSAYEA ERERTVEENK RKMEALNLRH 60 LSAAVATYAP KTPSPMKHKR RRVIEAATPV PSPPRRSRRL AHLPEVKYAD ACAEVGEDSE 120 RVGRWSPRRR SGSIYLAGGG GGPISMKARM EAASKAEELE SQLDPQFPSF MKRMLHSHVV 180 RGFWLGLPSH FCDTYLPKND CTITLVDEKD EEFESKYLAY KKGLSGGWAG FALDHVIRDG 240 DSTVFQLIKP TTFKVHIIRA AVGDDDNEEM E |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 79 | 83 | KRRRV |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G42700.1 | 2e-46 | B3 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC4AG000590.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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