PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG000080.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 296aa    MW: 31817.5 Da    PI: 7.3581
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG000080.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.84.3e-16107157255
               AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       g  GVr ++ +g+++AeIrd    + k +r++lg+f t+e Aa a+++a+ + +g
  TRIDC4AG000080.1 107 GLIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFNTPEAAAMAYDQAAFSVRG 157
                       567******.**********32..2.24**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
ASSTPDYHTS SSPMSSAFDM GDTDDMHLLN TLLLHMSGSG TAASSHHYAF DLHMDVDVEP  60
SSSSTSSSSS SYSSSDHHHQ QQQQGMPATT TAKRRAPQQL HPAATKGLIG VRKRPWGKFA  120
AEIRDSTRKG ARVWLGTFNT PEAAAMAYDQ AAFSVRGAAA VLNYPVDRVQ ESLRTLALRP  180
DVPGGSPVLA LKRRHSIRKR SPNKAKKTAT LLAPTKMMIN DSAAAPVQQQ SAAACAGVVE  240
LEDLGADYLE ELLRVSDEPS ASSTTMVMGA FDHHHHHHVD DQSALANTAP MLFPHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-45ERF family protein