PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG086000.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 381aa MW: 40159.4 Da PI: 4.887

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG086000.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.3	4.8e-31	148	204	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK +k+s++prsYYrCt ++C++kk+ver+ ++p+++++tYeg H h TRIDC3BG086000.2 148 DDGYKWRKYGQKAIKNSPNPRSYYRCTNPRCNAKKQVERAVDEPDTLVVTYEGLHLH 204 8******************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MEEMGEESSR YPWQDYDLGF GEELMRELLD QTTTAPTPSP AAMAAGAASA DNSSSSDKGI 60 GDEEEGAAGR RESMENRLMS TVYSGPTLSD IESALSFTGA GAGDPLDGRS KYHYSPSSPV 120 VFSPEKVLGK MENKYTMKIK SCGNGLADDG YKWRKYGQKA IKNSPNPRSY YRCTNPRCNA 180 KKQVERAVDE PDTLVVTYEG LHLHYTYSHF LQQQTNPPPA AAAAASSSKK PKLHPTAGAI 240 TVTDSHHGST PVPTTSPPSA AVVPAGAGDS SGDSGGNVTA DAGFLLEHAV PNCSPYLFDG 300 GLLSDAGEER RMPSDAGGLL EDMVPLMVRR PSCNSPATTA SSSTTLGSPP APMSSPSPST 360 SSVSWTPASP YIDMAILSNI F

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MEEMGEESSR YPWQDYDLGF GEELMRELLD QTTTAPTPSP AAMAAGAASA DNSSSSDKGI  60
GDEEEGAAGR RESMENRLMS TVYSGPTLSD IESALSFTGA GAGDPLDGRS KYHYSPSSPV  120
VFSPEKVLGK MENKYTMKIK SCGNGLADDG YKWRKYGQKA IKNSPNPRSY YRCTNPRCNA  180
KKQVERAVDE PDTLVVTYEG LHLHYTYSHF LQQQTNPPPA AAAAASSSKK PKLHPTAGAI  240
TVTDSHHGST PVPTTSPPSA AVVPAGAGDS SGDSGGNVTA DAGFLLEHAV PNCSPYLFDG  300
GLLSDAGEER RMPSDAGGLL EDMVPLMVRR PSCNSPATTA SSSTTLGSPP APMSSPSPST  360
SSVSWTPASP YIDMAILSNI F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	8e-44	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG086000.2