PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG079920.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SRS
Protein Properties Length: 308aa    MW: 31330 Da    PI: 8.184
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG079920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702225.88.5e-70932522154
            DUF702   2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssa 94 
                       +sgt++CqdCGnqakkdC+h+RCRtCCksrgfdC+thvkstWvpaa+rrerq+   ++ss   a+a++a sk++r l s++q ++s+t++s+a
  TRIDC3BG079920.1  93 GSGTTTCQDCGNQAKKDCTHSRCRTCCKSRGFDCSTHVKSTWVPAARRRERQHLGGSSSSP--ANATAAGSKKPRLL-SSQQPTTSHTSTSNA 182
                       57999**********************************************8877776444..56688999999986.788889999999*** PP

            DUF702  95 eskkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                       +++++ +t+s          lP++v+++avfrcvrv+svddge+e+aYq++v+i+GhvfkG+LydqG+++
  TRIDC3BG079920.1 183 TTPRSYDTTSshqdasfrgnLPRQVRAPAVFRCVRVTSVDDGEDEYAYQATVTINGHVFKGFLYDQGVDD 252
                       *****9999999*******************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
HHHDAAAAAA ASDAIFPLLS AGPCVLDPEA AKAAAAASGG IQFWQSAQHH HQQQHSPSAA  60
GGGGGGNPNP SLGAFYLKKP GPMLDPGGDG SSGSGTTTCQ DCGNQAKKDC THSRCRTCCK  120
SRGFDCSTHV KSTWVPAARR RERQHLGGSS SSPANATAAG SKKPRLLSSQ QPTTSHTSTS  180
NATTPRSYDT TSSHQDASFR GNLPRQVRAP AVFRCVRVTS VDDGEDEYAY QATVTINGHV  240
FKGFLYDQGV DDGRASNDID SSTGGAVPNM SELHLGGGGN AARGGGAGGG GGGQHILGGG  300
SSYGNTMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.16e-51SRS family protein