PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3BG073970.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 154aa MW: 17890 Da PI: 10.6836 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 52.2 | 1.1e-16 | 53 | 139 | 10 | 99 |
HHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS B3 10 vlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 +++++ l +++k+ae + ke+ + +++g++Wev+++++k++++ +++ GWk+F++ n+L gD ++F+l ++ ++ ++v+++ k TRIDC3BG073970.1 53 YGATRSLDISRKYAEVYlpF--KEQ---MLTLQRHGKKWEVRCRVKKNKNKRLMR-GWKHFARGNNLTLGDACLFELLRNkKKYVMNVHIIHK 139 55666799******999532..223...555668*********998888886555.********************99987888888888765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 154 aa Download sequence |
SSEDDHSLPG CILANGTLLN LNEVQKKQLK EKLRAINSEI PIYGCVIRKS SIYGATRSLD 60 ISRKYAEVYL PFKEQMLTLQ RHGKKWEVRC RVKKNKNKRL MRGWKHFARG NNLTLGDACL 120 FELLRNKKKY VMNVHIIHKS LYKRKCTSEG KLAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G49480.1 | 3e-10 | B3 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3BG073970.1 |