PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG072450.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 349aa MW: 38966.2 Da PI: 10.1845

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG072450.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.7	4.7e-09	11	67	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++R ++++ ++ +++lF+ + ++ ++e +e+++ +gLt +qV+ +F rR++ +k TRIDC3BG072450.9 11 KKPRDLLNPKAVNSMQSLFAVKDTLGKRETREISALCGLTVTQVREFFASRRTRVRK 67 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
AAGALSIKIG KKPRDLLNPK AVNSMQSLFA VKDTLGKRET REISALCGLT VTQVREFFAS 60 RRTRVRKAVR LSREKALKLE ASKTALKLEA SKTALKLEAS KTATNICSLN TEQTPLDIET 120 HAQVVEPLST LEPLEMFQSS SQLAEAPQSS LQQPEVQQCT ATPIPVTPTG MIQPTDAKIN 180 PDSVQKETKQ EEVAPGVESE DKKFLDSIFA LMRKEETFSG QVKLMEWILQ INNATILSWF 240 LTMGGLTIVS TWLSQAATEE QTTVILIIFK VLLHLPLHKA LPAHMSVVLQ TINRLRFYRT 300 QDISGRARNL LSRLSKVLVR SQASKKPQKD LICKQRISEI LHDESWRSE

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

AAGALSIKIG KKPRDLLNPK AVNSMQSLFA VKDTLGKRET REISALCGLT VTQVREFFAS  60
RRTRVRKAVR LSREKALKLE ASKTALKLEA SKTALKLEAS KTATNICSLN TEQTPLDIET  120
HAQVVEPLST LEPLEMFQSS SQLAEAPQSS LQQPEVQQCT ATPIPVTPTG MIQPTDAKIN  180
PDSVQKETKQ EEVAPGVESE DKKFLDSIFA LMRKEETFSG QVKLMEWILQ INNATILSWF  240
LTMGGLTIVS TWLSQAATEE QTTVILIIFK VLLHLPLHKA LPAHMSVVLQ TINRLRFYRT  300
QDISGRARNL LSRLSKVLVR SQASKKPQKD LICKQRISEI LHDESWRSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	67	RRTRVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	4e-76	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG072450.9