PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG071600.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 363aa MW: 39219.2 Da PI: 7.9278

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG071600.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	68	1.8e-21	78	160	3	85
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 ++d lP + +++i+k++lP + ++++d+++++ ec +efi +++se++d c r+++kti+++ ++ al +lGf++yve++ + TRIDC3BG071600.1 78 KEDVSLPKSTMTKIIKEMLPPDVRVARDTQDLLVECCVEFINLLSSESNDVCSRDDKKTIAPEHVIRALQDLGFKEYVEEVYA 160 67999**************************************************************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
LTQRAPRRPA RLTLTLATIP FCNPVVSQGA SPKAKPSLPS SARTHRSRRD APSAPQAQAP 60 SRARRRGMDP MDIVGKSKED VSLPKSTMTK IIKEMLPPDV RVARDTQDLL VECCVEFINL 120 LSSESNDVCS RDDKKTIAPE HVIRALQDLG FKEYVEEVYA AYEQHKLETL DSPKATKFTG 180 IEMTEEEAVA EQQRMFAEAR ARMNNGAAKP KEPALEPQNQ PQQPPQPQLQ LHPQAQQPPQ 240 PQSQLHHPQS QQPLHPQLQP YTQAPPQQPL HPQLQPYTQA PPQQPLQPPL QLYPQAQPEQ 300 PLQPQSSGST TGTCVISTAA PSTTGTTAAA TAAPAIPAIS TAAPSATPAD ASAAAAATST 360 PAT

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

LTQRAPRRPA RLTLTLATIP FCNPVVSQGA SPKAKPSLPS SARTHRSRRD APSAPQAQAP  60
SRARRRGMDP MDIVGKSKED VSLPKSTMTK IIKEMLPPDV RVARDTQDLL VECCVEFINL  120
LSSESNDVCS RDDKKTIAPE HVIRALQDLG FKEYVEEVYA AYEQHKLETL DSPKATKFTG  180
IEMTEEEAVA EQQRMFAEAR ARMNNGAAKP KEPALEPQNQ PQQPPQPQLQ LHPQAQQPPQ  240
PQSQLHHPQS QQPLHPQLQP YTQAPPQQPL HPQLQPYTQA PPQQPLQPPL QLYPQAQPEQ  300
PLQPQSSGST TGTCVISTAA PSTTGTTAAA TAAPAIPAIS TAAPSATPAD ASAAAAATST  360
PAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23090.4	1e-71	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG071600.1