PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG071360.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 808aa    MW: 90425.3 Da    PI: 6.4462
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG071360.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.52.5e-23131232199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g +W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3BG071360.8 131 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 219
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3BG071360.8 220 GESGELRVGVRRA 232
                       49999*****996 PP
2Auxin_resp106.43.3e-35257338183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tk++F+v+Y+Pr+s+seF+++++k+++++k+ +s+G+Rfkm+fe+e+++e+r++Gt+vg  +ld+  Wp+S WrsLk
  TRIDC3BG071360.8 257 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLDQ-LWPESSWRSLK 338
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 808 aa     Download sequence    
LSSSSSSCLM SHGFGGAGDP LYDELWHACA GPLVTVPRVG DMVYYFPQGH IEQVEASMNQ  60
VAANQMRLYD LPSKLLCRVL NVELKAEADT DEVYAQVMLM PEPEQSDATT TEKSSPATGG  120
TTPARLAVRS FCKTLTASDT STHGGFSVLR RHADECLPPL DMTQSPPTQE LVAKDLHGME  180
WRFRHIFRGQ PRRHLLQSGW SVFVSSKRLV AGDAFIFLRG ESGELRVGVR RAMRQLSNIA  240
SSVISSHSMH LGVLATAWHA INTKTMFTVY YKPRTSRSEF IIPYDKYMDS VKNIYSIGTR  300
FKMRFEGEEA PEQRFTGTIV GSDNLDQLWP ESSWRSLKVR WDESSTIPRP DRVSPWEIEP  360
ASSPPVNPLP LSRAKRSRPN VPPASPESSL RTKEGATKAD MDCAQAQRNQ NNTVLPGQEQ  420
RSNKLTDIND FDATVQKPMM WSPPPPNIGK TNPLTFQQRP SVHNSIQLGR RETDFKDASS  480
GAQPFGDSLG FFMQTTFDEA PNRLGSFKNQ FQDHSYARQF ADPYLFMHQQ PSLTVESSRK  540
MHTENNDLHF WNGPSTVYGN SIDQAQDFRF KEHPSNWLSP QFSRAEQPRV IRPHASIAPI  600
ELEKTTEGSD FKIFGFKVDT ASAGFNHLNS PMAGTHEPVL QTQPSVSLDH LQTDCSPEVS  660
LSIAGTTENE KNMQQCPQSS KDVQSKSHGA STRSCTKVHK QGVALGRSVD LSKFVDYDEL  720
TAELDKMFEF DGELMSSNKN WQIVYTDNEG DMMLVGDDPW EEFCSIVRKI CIYTKEEVQK  780
MNSKPSGPRK EEGSVDGDGA TEKFPHLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein