PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG071360.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 673aa    MW: 75622.4 Da    PI: 6.5978
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG071360.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.91.9e-2343144199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g +W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3BG071360.7  43 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 131
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3BG071360.7 132 GESGELRVGVRRA 144
                       49999*****996 PP
2Auxin_resp106.72.6e-35169250183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tk++F+v+Y+Pr+s+seF+++++k+++++k+ +s+G+Rfkm+fe+e+++e+r++Gt+vg  +ld+  Wp+S WrsLk
  TRIDC3BG071360.7 169 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLDQ-LWPESSWRSLK 250
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 673 aa     Download sequence    
DTDEVYAQVM LMPEPEQSDA TTTEKSSPAT GGTTPARLAV RSFCKTLTAS DTSTHGGFSV  60
LRRHADECLP PLDMTQSPPT QELVAKDLHG MEWRFRHIFR GQPRRHLLQS GWSVFVSSKR  120
LVAGDAFIFL RGESGELRVG VRRAMRQLSN IASSVISSHS MHLGVLATAW HAINTKTMFT  180
VYYKPRTSRS EFIIPYDKYM DSVKNIYSIG TRFKMRFEGE EAPEQRFTGT IVGSDNLDQL  240
WPESSWRSLK VRWDESSTIP RPDRVSPWEI EPASSPPVNP LPLSRAKRSR PNVPPASPES  300
SLRTKEGATK ADMDCAQAQR NQNNTVLPGQ EQRSNKLTDI NDFDATVQKP MMWSPPPPNI  360
GKTNPLTFQQ RPSVHNSIQL GRRETDFKDA SSGAQPFGDS LGFFMQTTFD EAPNRLGSFK  420
NQFQDHSYAR QFADPYLFMH QQPSLTVESS RKMHTENNDL HFWNGPSTVY GNSIDQAQDF  480
RFKEHPSNWL SPQFSRAEQP RVIRPHASIA PIELEKTTEG SDFKIFGFKV DTASAGFNHL  540
NSPMAGTHEP VLQTQPSVSL DHLQTDCSPE VSLSIAGTTE NEKNMQQCPQ SSKDVQSKSH  600
GASTRSCTKV HKQGVALGRS VDLSKFVDYD ELTAELDKMF EFDGELMSSN KNWQIVYTDN  660
EGDMMLVGDD PWE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein