PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG071360.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 601aa    MW: 67957.9 Da    PI: 6.9102
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG071360.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.64.8e-188723399
                      -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      +++l+ +d++g +W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+v+v+r+
  TRIDC3BG071360.5  8 TQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGESGELRVGVRRA 72
                      34899**********************************************..449999*****996 PP
2Auxin_resp106.92.2e-3597178183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tk++F+v+Y+Pr+s+seF+++++k+++++k+ +s+G+Rfkm+fe+e+++e+r++Gt+vg  +ld+  Wp+S WrsLk
  TRIDC3BG071360.5  97 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLDQ-LWPESSWRSLK 178
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 601 aa     Download sequence    
DMTQSPPTQE LVAKDLHGME WRFRHIFRGQ PRRHLLQSGW SVFVSSKRLV AGDAFIFLRG  60
ESGELRVGVR RAMRQLSNIA SSVISSHSMH LGVLATAWHA INTKTMFTVY YKPRTSRSEF  120
IIPYDKYMDS VKNIYSIGTR FKMRFEGEEA PEQRFTGTIV GSDNLDQLWP ESSWRSLKVR  180
WDESSTIPRP DRVSPWEIEP ASSPPVNPLP LSRAKRSRPN VPPASPESSL RTKEGATKAD  240
MDCAQAQRNQ NNTVLPGQEQ RSNKLTDIND FDATVQKPMM WSPPPPNIGK TNPLTFQQRP  300
SVHNSIQLGR RETDFKDASS GAQPFGDSLG FFMQTTFDEA PNRLGSFKNQ FQDHSYARQF  360
ADPYLFMHQQ PSLTVESSRK MHTENNDLHF WNGPSTVYGN SIDQAQDFRF KEHPSNWLSP  420
QFSRAEQPRV IRPHASIAPI ELEKTTEGSD FKIFGFKVDT ASAGFNHLNS PMAGTHEPVL  480
QTQPSVSLDH LQTDCSPEVS LSIAGTTENE KNMQQCPQSS KDVQSKSHGA STRSCTKVHK  540
QGVALGRSVD LSKFVDYDEL TAELDKMFEF DGELMSSNKN WQIVYTDNEG DMMLVGDDPW  600
E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.31e-166ARF family protein