PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG071360.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 772aa    MW: 86433.7 Da    PI: 6.4014
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG071360.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.62.4e-2380181199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g +W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3BG071360.4  80 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 168
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3BG071360.4 169 GESGELRVGVRRA 181
                       49999*****996 PP
2Auxin_resp106.43.1e-35206287183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tk++F+v+Y+Pr+s+seF+++++k+++++k+ +s+G+Rfkm+fe+e+++e+r++Gt+vg  +ld+  Wp+S WrsLk
  TRIDC3BG071360.4 206 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLDQ-LWPESSWRSLK 287
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 772 aa     Download sequence    
AEVEASMNQV AANQMRLYDL PSKLLCRVLN VELKAEADTD EVYAQVMLMP EPEQSDATTT  60
EKSSPATGGT TPARLAVRSF CKTLTASDTS THGGFSVLRR HADECLPPLD MTQSPPTQEL  120
VAKDLHGMEW RFRHIFRGQP RRHLLQSGWS VFVSSKRLVA GDAFIFLRGE SGELRVGVRR  180
AMRQLSNIAS SVISSHSMHL GVLATAWHAI NTKTMFTVYY KPRTSRSEFI IPYDKYMDSV  240
KNIYSIGTRF KMRFEGEEAP EQRFTGTIVG SDNLDQLWPE SSWRSLKVRW DESSTIPRPD  300
RVSPWEIEPA SSPPVNPLPL SRAKRSRPNV PPASPESSLR TKEGATKADM DCAQAQRNQN  360
NTVLPGQEQR SNKLTDINDF DATVQKPMMW SPPPPNIGKT NPLTFQQRPS VHNSIQLGRR  420
ETDFKDASSG AQPFGDSLGF FMQTTFDEAP NRLGSFKNQF QDHSYARQFA DPYLFMHQQP  480
SLTVESSRKM HTENNDLHFW NGPSTVYGNS IDQAQDFRFK EHPSNWLSPQ FSRAEQPRVI  540
RPHASIAPIE LEKTTEGSDF KIFGFKVDTA SAGFNHLNSP MAGTHEPVLQ TQPSVSLDHL  600
QTDCSPEVSL SIAGTTENEK NMQQCPQSSK DVQSKSHGAS TRSCTKVHKQ GVALGRSVDL  660
SKFVDYDELT AELDKMFEFD GELMSSNKNW QIVYTDNEGD MMLVGDDPWE EFCSIVRKIC  720
IYTKEEVQKM NSKPSGPRKE EGSVDGDGAT EKAHLPESSD LNSSQLGCVK AD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein