PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG071360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 793aa MW: 88818.5 Da PI: 6.4423 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 73.6 | 2.5e-23 | 101 | 202 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++ +++a+e+ +++++ ++l+ +d++g +W++++i+r++++r++l++GW+ Fv++++L +gD ++F + TRIDC3BG071360.1 101 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 189 99*****************************7555544..58************************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++el+v+v+r+ TRIDC3BG071360.1 190 GESGELRVGVRRA 202 49999*****996 PP | |||||||
2 | Auxin_resp | 106.4 | 3.3e-35 | 227 | 308 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++tk++F+v+Y+Pr+s+seF+++++k+++++k+ +s+G+Rfkm+fe+e+++e+r++Gt+vg +ld+ Wp+S WrsLk TRIDC3BG071360.1 227 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLDQ-LWPESSWRSLK 308 89******************************************************************999.9********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 793 aa Download sequence |
GPLVTVPRVG DMVYYFPQGH IEQVEASMNQ VAANQMRLYD LPSKLLCRVL NVELKAEADT 60 DEVYAQVMLM PEPEQSDATT TEKSSPATGG TTPARLAVRS FCKTLTASDT STHGGFSVLR 120 RHADECLPPL DMTQSPPTQE LVAKDLHGME WRFRHIFRGQ PRRHLLQSGW SVFVSSKRLV 180 AGDAFIFLRG ESGELRVGVR RAMRQLSNIA SSVISSHSMH LGVLATAWHA INTKTMFTVY 240 YKPRTSRSEF IIPYDKYMDS VKNIYSIGTR FKMRFEGEEA PEQRFTGTIV GSDNLDQLWP 300 ESSWRSLKVR WDESSTIPRP DRVSPWEIEP ASSPPVNPLP LSRAKRSRPN VPPASPESSL 360 RTKEGATKAD MDCAQAQRNQ NNTVLPGQEQ RSNKLTDIND FDATVQKPMM WSPPPPNIGK 420 TNPLTFQQRP SVHNSIQLGR RETDFKDASS GAQPFGDSLG FFMQTTFDEA PNRLGSFKNQ 480 FQDHSYARQF ADPYLFMHQQ PSLTVESSRK MHTENNDLHF WNGPSTVYGN SIDQAQDFRF 540 KEHPSNWLSP QFSRAEQPRV IRPHASIAPI ELEKTTEGSD FKIFGFKVDT ASAGFNHLNS 600 PMAGTHEPVL QTQPSVSLDH LQTDCSPEVS LSIAGTTENE KNMQQCPQSS KDVQSKSHGA 660 STRSCTKVHK QGVALGRSVD LSKFVDYDEL TAELDKMFEF DGELMSSNKN WQIVYTDNEG 720 DMMLVGDDPW EEFCSIVRKI CIYTKEEVQK MNSKPSGPRK EEGSVDGDGA TEKAHLPESS 780 DLNSSQLGCV KAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62000.3 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG071360.1 |