PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG070170.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 747aa    MW: 83875.7 Da    PI: 6.6813
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG070170.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.36e-2377178199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g  W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3BG070170.6  77 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 165
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3BG070170.6 166 GESGELRVGVRRA 178
                       49999*****996 PP
2Auxin_resp111.49.1e-37203284183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tks+F+v+Y+Pr+s+seF+++++++++++k+++s+GmRf+m+fe+e+++e+r++Gt+vg ++ld+  Wp+S+WrsLk
  TRIDC3BG070170.6 203 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQ-LWPESNWRSLK 284
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    
QVEASMNQVA GNQMRLYDLP SKLLCRVINV ELKAEADTDE VYAQVMLMPE PEQNEMAVDK  60
STSTTGATPP RPAVRSFCKT LTASDTSTHG GFSVLRRHAD ECLPPLDMTQ SPPTQELVAK  120
DLHGMDWRFR HIFRGQPRRH LLQSGWSVFV SSKRLVAGDA FIFLRGESGE LRVGVRRAMR  180
QLSNVPSSVI SSHSMHLGVL ATAWHAINTK SMFTVYYKPR TSPSEFIIPY DQYMESVKNN  240
YSIGMRFRMR FEGEEAPEQR FTGTIVGSEN LDQLWPESNW RSLKVRWDEP STIPRPDRVS  300
PWKIEPASSP PVNPLPLSRV KRPRPNVPPV SPESSVLTKE GATKIDMDSA QAQQRNQNNM  360
VLQGQEHMTL RTNNLTASND SDATVQKPMM WSPSPNIGKN HASAFQQRPS MDNWMQLGRC  420
DASSGAQSFG DSQGFFMQTF DEAPNRHGSF KNQFQDHSSA RHFSDPYTKM QTEANEFHFW  480
NSQSTVYGNP RDQSQGFRFE EHPSNWLRQQ QFSPVEQPRV IRPHASIAPV DLEKAREGSG  540
FKIFGFKVDT TSTPSNHLSS SMAAIHEPVL QIQASASLTQ LQHTHADCIP ELSVSTAGTT  600
ENEKSIQQAP HSSKDVQSKS HGASTRSCTK VHKQGVALGR SVDLSKFGDY DELTAELDRM  660
FEFDGELMSS NKDWQIVYTD PEGDMMLVGD DPWEEFCNIV RKIFIYTKEE VQKMNSKSSA  720
PRKEEGSGDA DGANEKAHLA TSSHLDN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1321325KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein