PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG070170.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 750aa    MW: 84255.1 Da    PI: 6.6418
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG070170.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.36.1e-2380181199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g  W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3BG070170.5  80 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 168
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3BG070170.5 169 GESGELRVGVRRA 181
                       49999*****996 PP
2Auxin_resp111.49.2e-37206287183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tks+F+v+Y+Pr+s+seF+++++++++++k+++s+GmRf+m+fe+e+++e+r++Gt+vg ++ld+  Wp+S+WrsLk
  TRIDC3BG070170.5 206 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQ-LWPESNWRSLK 287
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 750 aa     Download sequence    
HIEQVEASMN QVAGNQMRLY DLPSKLLCRV INVELKAEAD TDEVYAQVML MPEPEQNEMA  60
VDKSTSTTGA TPPRPAVRSF CKTLTASDTS THGGFSVLRR HADECLPPLD MTQSPPTQEL  120
VAKDLHGMDW RFRHIFRGQP RRHLLQSGWS VFVSSKRLVA GDAFIFLRGE SGELRVGVRR  180
AMRQLSNVPS SVISSHSMHL GVLATAWHAI NTKSMFTVYY KPRTSPSEFI IPYDQYMESV  240
KNNYSIGMRF RMRFEGEEAP EQRFTGTIVG SENLDQLWPE SNWRSLKVRW DEPSTIPRPD  300
RVSPWKIEPA SSPPVNPLPL SRVKRPRPNV PPVSPESSVL TKEGATKIDM DSAQAQQRNQ  360
NNMVLQGQEH MTLRTNNLTA SNDSDATVQK PMMWSPSPNI GKNHASAFQQ RPSMDNWMQL  420
GRCDASSGAQ SFGDSQGFFM QTFDEAPNRH GSFKNQFQDH SSARHFSDPY TKMQTEANEF  480
HFWNSQSTVY GNPRDQSQGF RFEEHPSNWL RQQQFSPVEQ PRVIRPHASI APVDLEKARE  540
GSGFKIFGFK VDTTSTPSNH LSSSMAAIHE PVLQIQASAS LTQLQHTHAD CIPELSVSTA  600
GTTENEKSIQ QAPHSSKDVQ SKSHGASTRS CTKVHKQGVA LGRSVDLSKF GDYDELTAEL  660
DRMFEFDGEL MSSNKDWQIV YTDPEGDMML VGDDPWEEFC NIVRKIFIYT KEEVQKMNSK  720
SSAPRKEEGS GDADGANEKA HLATSSHLDN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1324328KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein