PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG070170.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 627aa    MW: 70384.9 Da    PI: 8.3913
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG070170.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.74.6e-2372173199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g  W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3BG070170.4  72 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 160
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3BG070170.4 161 GESGELRVGVRRA 173
                       49999*****996 PP
2Auxin_resp111.77.1e-37198279183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tks+F+v+Y+Pr+s+seF+++++++++++k+++s+GmRf+m+fe+e+++e+r++Gt+vg ++ld+  Wp+S+WrsLk
  TRIDC3BG070170.4 198 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQ-LWPESNWRSLK 279
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    
MNQVAGNQMR LYDLPSKLLC RVINVELKAE ADTDEVYAQV MLMPEPEQNE MAVDKSTSTT  60
GATPPRPAVR SFCKTLTASD TSTHGGFSVL RRHADECLPP LDMTQSPPTQ ELVAKDLHGM  120
DWRFRHIFRG QPRRHLLQSG WSVFVSSKRL VAGDAFIFLR GESGELRVGV RRAMRQLSNV  180
PSSVISSHSM HLGVLATAWH AINTKSMFTV YYKPRTSPSE FIIPYDQYME SVKNNYSIGM  240
RFRMRFEGEE APEQRFTGTI VGSENLDQLW PESNWRSLKV RWDEPSTIPR PDRVSPWKIE  300
PASSPPVNPL PLSRVKRPRP NVPPVSPESS VLTKEGATKI DMDSAQAQQR NQNNMVLQGQ  360
EHMTLRTNNL TASNDSDATV QKPMMWSPSP NIGKNHASAF QQRPSMDNWM QLGRCDASSG  420
AQSFGDSQGF FMQTFDEAPN RHGSFKNQFQ DHSSARHFSD PYTKMQTEAN EFHFWNSQST  480
VYGNPRDQSQ GFRFEEHPSN WLRQQQFSPV EQPRVIRPHA SIAPVDLEKA REGSGFKIFG  540
FKVDTTSTPS NHLSSSMAAI HEPVLQIQAS ASLTQLQHTH ADCIPELSVS TAGTTENEKS  600
IQQAPHSSKD VQSKSHGAST RSCTKLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1316320KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein