PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG070090.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 197aa MW: 21876 Da PI: 12.3514 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 64.5 | 2.3e-20 | 24 | 93 | 1 | 72 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 rWt++e+l+Li+a+r +e+r + +W+ vs+++r++g+er+p qC+++w nl+++ kki ++ekk + TRIDC3BG070090.2 24 RWTRHETLVLIQAKRVTEQRAAQ--PVRLKWAVVSAYCRRHGVERGPMQCRKRWGNLSWDLKKIVAWEKKAR 93 8****************998655..5899****************************************973 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
EMMSANGDSP AGAAVTTPRS RLPRWTRHET LVLIQAKRVT EQRAAQPVRL KWAVVSAYCR 60 RHGVERGPMQ CRKRWGNLSW DLKKIVAWEK KARHCRRRRH GRRGLGGAGA RVVLGHARGG 120 AARQAAAVVV RPGGLRCHRR RRRRRQPAEA GLCRGDGARR RRGRTPAVAD DGHAHPSDGE 180 RQEAGVGQEL DVAAGQR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 136 | 145 | RCHRRRRRRR |
2 | 139 | 144 | RRRRRR |
3 | 139 | 145 | RRRRRRR |
4 | 139 | 162 | RRRRRRRQPAEAGLCRGDGARRRR |
5 | 140 | 145 | RRRRRR |
6 | 140 | 163 | RRRRRRRQPAEAGLCRGDGARRRR |
7 | 141 | 164 | RRRRRRRQPAEAGLCRGDGARRRR |
8 | 142 | 165 | RRRRRRRQPAEAGLCRGDGARRRR |
9 | 143 | 166 | RRRRRRRQPAEAGLCRGDGARRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 8e-25 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG070090.2 |