PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG069810.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 262aa    MW: 28545.9 Da    PI: 9.2383
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG069810.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.13e-1673118147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg W + Ed +l ++v+++G+ +W++Ia+++  gR++k+c++rw++ 
  TRIDC3BG069810.3  73 RGHWRPAEDIKLRELVALYGPQNWNLIAEKLD-GRSGKSCRLRWFNQ 118
                       899*****************************.***********996 PP
2Myb_DNA-binding51.52.4e-16126168246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        +++ +E+e+l  a++ +G++ W+ Iar ++ gRt++ +k++w+ 
  TRIDC3BG069810.3 126 RPFSDDEEERLMAAHRFYGNK-WSMIARLFP-GRTDNAVKNHWHV 168
                       689******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MPSSSACPPW LVRMMAANDD QASSSSSSKG GGAVLTTGTA TIDTGYRGGG GEGGNAADPQ  60
ESSSSGQSRL AARGHWRPAE DIKLRELVAL YGPQNWNLIA EKLDGRSGKS CRLRWFNQLD  120
PRISKRPFSD DEEERLMAAH RFYGNKWSMI ARLFPGRTDN AVKNHWHVIM ARKYREQSIA  180
YRRRKLNQAV QRTLDSSSGL ASGAGHVDVV GHHHNHLLVA ANDSAIFAEP YGFSFRHCCL  240
SFPAGAAAAS ALEPTFCLFP GE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.12e-71MYB family protein