PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG069110.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 832aa MW: 94073.4 Da PI: 7.0458

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG069110.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	154.3	2.6e-48	15	130	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e k+rwlk++e+++iL n e + +++ +++rp+sgs++L+nr++ r+fr+DGy+w+kk++gk+ +E+he LKv++v++l+cyYa++e+nptf TRIDC3BG069110.3 15 REvKTRWLKPREVLDILRNCELFGIQNRTPQRPPSGSWFLFNRRVHRFFRNDGYQWQKKRNGKSGNEAHEYLKVDNVKALNCYYARAENNPTF 107 56699************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylev 117 rr+yw+Le ++e+ivlvhy++v TRIDC3BG069110.3 108 MRRIYWMLEPAYEHIVLVHYRDV 130 ******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 832 aa Download sequence
MQQQQQGLDI QNLQREVKTR WLKPREVLDI LRNCELFGIQ NRTPQRPPSG SWFLFNRRVH 60 RFFRNDGYQW QKKRNGKSGN EAHEYLKVDN VKALNCYYAR AENNPTFMRR IYWMLEPAYE 120 HIVLVHYRDV LEGSISVSAL NGSPTSYQNG SASRADAHSS PGLTSEIIAP RLLSRSPGSA 180 EEVSSQILTI NNESNDTSQF DWRRMLEMQL SLENKERHDV TGEILPNHDP NPIPGIQNEE 240 FDTGTNLADI FYELEEFSED NRTEGSQPYR DPIDVIRNSA WLEEDQLNSF LHSPPVTVDE 300 NQWFHIYEVS PEWAFCSESA KVVIAGDFPS NILWVLFGDV KVPAEIVQQG VIRCYTPSYL 360 GAGKVRMCML DENGKPCTEA REFGFVEKPT NTMIIGNGKP CSEAREFEFQ QRPTKSDNEL 420 LLLLNYVQML FDSHGCELFS KFRLPLPNVQ SGFPVNPSEI IGRTCEQLDH ENAVNCIMEV 480 MLNSKFEDWL SSKFEQNSQG VYLLPKQYHG VIHTIAALGY DWALKPLLNN GVPINYRDAN 540 GWTALHWAAR FGRQQMVAVL VAAGAAVGAL SDPTAEDPAA KTPASIASAY GFIGISAFLS 600 EAELTSTFHS LESQENGKPV DHNGGVSTSS AVDRVSDKCA HMDGGTDDQL ALKDSLGAIR 660 NAVQAAGCIQ ATFRVFSLKK KKQKALQNGD SSASPSMLER AALSIQKNFR CWKKRKEYQK 720 VRKNVIKIQA RFRAHRERNK YKELLQSVGI LEKIMLRWFR KGVGLRGINS RAMPIDQDEE 780 EDIVKVFRKE RVETAVSEAV SRVSAIVGCP VARLDYRRML EMHQQAKIGH GK

Sequence ? help Back to Top

Protein Sequence Length: 832 aa Download sequence

MQQQQQGLDI QNLQREVKTR WLKPREVLDI LRNCELFGIQ NRTPQRPPSG SWFLFNRRVH  60
RFFRNDGYQW QKKRNGKSGN EAHEYLKVDN VKALNCYYAR AENNPTFMRR IYWMLEPAYE  120
HIVLVHYRDV LEGSISVSAL NGSPTSYQNG SASRADAHSS PGLTSEIIAP RLLSRSPGSA  180
EEVSSQILTI NNESNDTSQF DWRRMLEMQL SLENKERHDV TGEILPNHDP NPIPGIQNEE  240
FDTGTNLADI FYELEEFSED NRTEGSQPYR DPIDVIRNSA WLEEDQLNSF LHSPPVTVDE  300
NQWFHIYEVS PEWAFCSESA KVVIAGDFPS NILWVLFGDV KVPAEIVQQG VIRCYTPSYL  360
GAGKVRMCML DENGKPCTEA REFGFVEKPT NTMIIGNGKP CSEAREFEFQ QRPTKSDNEL  420
LLLLNYVQML FDSHGCELFS KFRLPLPNVQ SGFPVNPSEI IGRTCEQLDH ENAVNCIMEV  480
MLNSKFEDWL SSKFEQNSQG VYLLPKQYHG VIHTIAALGY DWALKPLLNN GVPINYRDAN  540
GWTALHWAAR FGRQQMVAVL VAAGAAVGAL SDPTAEDPAA KTPASIASAY GFIGISAFLS  600
EAELTSTFHS LESQENGKPV DHNGGVSTSS AVDRVSDKCA HMDGGTDDQL ALKDSLGAIR  660
NAVQAAGCIQ ATFRVFSLKK KKQKALQNGD SSASPSMLER AALSIQKNFR CWKKRKEYQK  720
VRKNVIKIQA RFRAHRERNK YKELLQSVGI LEKIMLRWFR KGVGLRGINS RAMPIDQDEE  780
EDIVKVFRKE RVETAVSEAV SRVSAIVGCP VARLDYRRML EMHQQAKIGH GK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	679	716	KKKKQKALQNGDSSASPSMLERAALSIQKNFRCWKKRK
2	713	742	KKRKEYQKVRKNVIKIQARFRAHRERNKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16940.1	1e-100	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG069110.3