PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG068940.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 182aa    MW: 20126.3 Da    PI: 9.0515
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG068940.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP70.72.7e-222433778
                      TEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP 37 gleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
                      g++qrfCqqCsrfh l efDe krsCr+rL++hn+rrrk+q 
  TRIDC3BG068940.3  2 GQQQRFCQQCSRFHLLGEFDEVKRSCRKRLDGHNRRRRKPQR 43
                      899************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
AGQQQRFCQQ CSRFHLLGEF DEVKRSCRKR LDGHNRRRRK PQRDPLNPAG LFANHHGVTR  60
FASYPQIFSP TSMAEPKWPG GIAVKTEADA FHEQYYSFSG AASLFHHGKP ERKHFPFLTD  120
GGGEATFGCQ PPAFTITPSS ESSSNSSRHS NGKTTMFAHD GGPDHNCALS LLSDNPASAH  180
IM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12441KRSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.11e-14SBP family protein