PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG068940.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 363aa MW: 38773.1 Da PI: 9.1154

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG068940.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.1	3.9e-41	80	156	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C vegC+adls+++eyhrrhkvCe+hsk+pvv+v+g++qrfCqqCsrfh l efDe krsCr+rL++hn+rrrk+q TRIDC3BG068940.1 80 CSVEGCTADLSRCREYHRRHKVCEAHSKTPVVAVAGQQQRFCQQCSRFHLLGEFDEVKRSCRKRLDGHNRRRRKPQR 156 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MDSWEPKMPS WDLGTVVAPS SGGGGGGGAL DLKLGAPTSW RPVPAGAAAA VVSVQQQQPP 60 SAAPAKRARA GQGQQTVPPC SVEGCTADLS RCREYHRRHK VCEAHSKTPV VAVAGQQQRF 120 CQQCSRFHLL GEFDEVKRSC RKRLDGHNRR RRKPQRDPLN PAGLFANHHG VTRFASYPQI 180 FSPTSMAEPK WPGGIAVKTE ADAFHEQYYS FSGAASLFHH GKPERKHFPF LTDGGGEATF 240 GCQPPAFTIT PSSESSSNSS RHSNGKTTMF AHDGGPDHNC ALSLLSYVSL GDKGAPMLHA 300 SNRSQHAAAT AATAVATSTA AAPAASQLQQ QYHGYYHHQH QVSADQGSHP DAGGMHALPF 360 SSW

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MDSWEPKMPS WDLGTVVAPS SGGGGGGGAL DLKLGAPTSW RPVPAGAAAA VVSVQQQQPP  60
SAAPAKRARA GQGQQTVPPC SVEGCTADLS RCREYHRRHK VCEAHSKTPV VAVAGQQQRF  120
CQQCSRFHLL GEFDEVKRSC RKRLDGHNRR RRKPQRDPLN PAGLFANHHG VTRFASYPQI  180
FSPTSMAEPK WPGGIAVKTE ADAFHEQYYS FSGAASLFHH GKPERKHFPF LTDGGGEATF  240
GCQPPAFTIT PSSESSSNSS RHSNGKTTMF AHDGGPDHNC ALSLLSYVSL GDKGAPMLHA  300
SNRSQHAAAT AATAVATSTA AAPAASQLQQ QYHGYYHHQH QVSADQGSHP DAGGMHALPF  360
SSW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	137	154	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	4e-33	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG068940.1