PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG066600.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 392aa MW: 44448.1 Da PI: 4.9975

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG066600.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	69.8	4.8e-22	10	96	2	91
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 +e+d f+P+a+++rim kv+ ++k+ v+e vsefi+ +s sd+c+r kr +++ ddll +a+ Gf+d++eplk+yl+ky+ TRIDC3BG066600.1 10 EERDVFVPVADITRIMGKVILPDGKMDGG---AVRELVSEFITRRASSESDRCKRAKREAMTVDDLLSEMAKQGFQDHIEPLKAYLHKYK 96 5899**************999876...599*****************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
GSPTAGRIGE ERDVFVPVAD ITRIMGKVIL PDGKMDGGAV RELVSEFITR RASSESDRCK 60 RAKREAMTVD DLLSEMAKQG FQDHIEPLKA YLHKYKVELP CTTEVEPNPL PVSDIRDWSE 120 LPLDALSAIF MKLGTIEILM GAGLVCHSWL VAAKSPELWR FVDMTRHKVV FSEAEKVMCK 180 MAKVAIDRSD GRMESFCAQK FVTSELLNYI ASRCHSLKSI RLIGTMYFWD DEDVVIKLAA 240 KCPMLQEIEC SDQKQPWPFF TRIGAARPEL KRLRVRYPWF DSDSILMNDE GEKEEESDEA 300 WEARQNQEAF AIAESLHELR LLQMSGYGLT NKGVYAILEG CPHLEFLDLR ECLHIEVNAE 360 LQARCANIRH VQLPGVGPYV PCPELHTIEA DE

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

GSPTAGRIGE ERDVFVPVAD ITRIMGKVIL PDGKMDGGAV RELVSEFITR RASSESDRCK  60
RAKREAMTVD DLLSEMAKQG FQDHIEPLKA YLHKYKVELP CTTEVEPNPL PVSDIRDWSE  120
LPLDALSAIF MKLGTIEILM GAGLVCHSWL VAAKSPELWR FVDMTRHKVV FSEAEKVMCK  180
MAKVAIDRSD GRMESFCAQK FVTSELLNYI ASRCHSLKSI RLIGTMYFWD DEDVVIKLAA  240
KCPMLQEIEC SDQKQPWPFF TRIGAARPEL KRLRVRYPWF DSDSILMNDE GEKEEESDEA  300
WEARQNQEAF AIAESLHELR LLQMSGYGLT NKGVYAILEG CPHLEFLDLR ECLHIEVNAE  360
LQARCANIRH VQLPGVGPYV PCPELHTIEA DE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38880.6	1e-21	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG066600.1