PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3BG065950.9 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 525aa MW: 58061.1 Da PI: 8.063 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29 | 2.4e-09 | 407 | 454 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +WT E ++lvd+v+q+G+g W+ I r Rt ++k++w+++ TRIDC3BG065950.9 407 AWTLSEVLKLVDGVAQFGPGKWSEIRRLSFasySYRTSVDLKDKWRNL 454 7**************************99999*99***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 525 aa Download sequence |
DKVDRLKPSV DSLDIPSKCT VDHDHKPDKL NTEQGDNNIV HQDNASTETP KSTVLNDSCS 60 AEKEKTDACS RSVNNSSTGP SVSGVTSSVP DFSILRGEVC LDNLTIRELQ EAFRATFGRE 120 TTVKDKLWLK RRITMGLTNS CDVQSSGCVV KDYKIVCKDA KHELPTIEGI PKAEVEATSL 180 VRYQVLGPGN ERDTPSCSYY RSEDQQRSSN RLKGVSTDND ESEGTLQDEQ GAAKRLRKPT 240 KRYIEELSDT ETLDSTGKLS SPGKRAAHGE VLLRQRVTPL QEVDSLSITY PTRKDTFGGF 300 SVHVPYASRM RRGRPRRNFI SFLDDDPPVE CPEIQMAVET MSGKDGEHVN HVNSAVEVPL 360 METAEKKGGH IETADNKEIH SIEADDICRS DAKTKTKRGL KRKHHRAWTL SEVLKLVDGV 420 AQFGPGKWSE IRRLSFASYS YRTSVDLKDK WRNLIRASQT QLSPENDGVC PRKSNPSIIP 480 VPPAILLRVK ELAELQPQAG NLAAAIKFSG QSSKVAQGRG SSGFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G72650.1 | 1e-77 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3BG065950.9 |