PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG065950.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 397aa MW: 43978.6 Da PI: 9.1343

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG065950.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.6	1.7e-09	283	330	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +WT E ++lvd+v+q+G+g W+ I r Rt ++k++w+++ TRIDC3BG065950.5 283 AWTLSEVLKLVDGVAQFGPGKWSEIRRLSFasySYRTSVDLKDKWRNL 330 7*************************9999999***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MGLTNSCDVQ SSGCVVKDYK IVCKDAKHEL PTIEGIPKAE VEATSLVRYQ VLGPGNERDT 60 PSCSYYRSED QQRSSNRLKG VSTDNDESEG TLQDEQGAAK RLRKPTKRYI EELSDTETLD 120 STGKLSSPGK RAAHGEVLLR QRVTPLQEVD SLSITYPTRK DTFGGFSVHV PYASRMRRGR 180 PRRNFISFLD DDPPVECPEI QMAVETMSGK DGEHVNHVNS AVEVPLMKNT EKKGGHIETA 240 EKKGGHIETA DNKEIHSIEA DDICRSDAKT KTKRGLKRKH HRAWTLSEVL KLVDGVAQFG 300 PGKWSEIRRL SFASYSYRTS VDLKDKWRNL IRASQTQLSP ENDGVCPRKS NPSIIPVPPA 360 ILLRVKELAE LQPQAGNLAA AIKFSGQSSK VAQGRGS

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MGLTNSCDVQ SSGCVVKDYK IVCKDAKHEL PTIEGIPKAE VEATSLVRYQ VLGPGNERDT  60
PSCSYYRSED QQRSSNRLKG VSTDNDESEG TLQDEQGAAK RLRKPTKRYI EELSDTETLD  120
STGKLSSPGK RAAHGEVLLR QRVTPLQEVD SLSITYPTRK DTFGGFSVHV PYASRMRRGR  180
PRRNFISFLD DDPPVECPEI QMAVETMSGK DGEHVNHVNS AVEVPLMKNT EKKGGHIETA  240
EKKGGHIETA DNKEIHSIEA DDICRSDAKT KTKRGLKRKH HRAWTLSEVL KLVDGVAQFG  300
PGKWSEIRRL SFASYSYRTS VDLKDKWRNL IRASQTQLSP ENDGVCPRKS NPSIIPVPPA  360
ILLRVKELAE LQPQAGNLAA AIKFSGQSSK VAQGRGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	6e-51	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG065950.5