PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG065950.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 643aa MW: 71280.4 Da PI: 5.1254

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG065950.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.7	3.2e-09	525	572	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +WT E ++lvd+v+q+G+g W+ I r Rt ++k++w+++ TRIDC3BG065950.4 525 AWTLSEVLKLVDGVAQFGPGKWSEIRRLSFasySYRTSVDLKDKWRNL 572 7*************************9999999***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence
MEVDTLQDAQ ETKNGGNDFK ENGSLDPVVY QLVRVEGDGT LVPPTEDEVL QIEQFLDDKV 60 DLPSIDDVGN VEDFFTNDCM LLKEPDFEEG YSELETNGEI HTQQFDADLE VDRLKPSVDS 120 LDIPSKCTVD HDHKPDKLNT EQGDNNIVHQ DNASTETPKS TVLNDSCSAE KEKTDACSRS 180 VNNSSTGPSV SGVTSSVPDF SILRGEVCLD NLTIRELQEA FRATFGRETT VKDKLWLKRR 240 ITMGLTNSCD VQSSGCVVKD YKIVCKDAKH ELPTIEGIPK AEVEATSLVR YQVLGPGNER 300 DTPSCSYYRS EDQQRSSNRL KGVSTDNDES EGTLQDEQGA AKRLRKPTKR YIEELSDTET 360 LDSTGKLSSP GKRAAHGEVL LRQRVTPLQE VDSLSITYPT RKDTFGGFSV HVPYASRMRR 420 GRPRRNFISF LDDDPPVECP EIQMAVETMS GKDGEHVNHV NSAVEVPLMK NTEKKGGHIE 480 TAEKKGGHIE TADNKEIHSI EADDICRSDA KTKTKRGLKR KHHRAWTLSE VLKLVDGVAQ 540 FGPGKWSEIR RLSFASYSYR TSVDLKDKWR NLIRASQTQL SPENDGVCPR KSNPSIIPVP 600 PAILLRVKEL AELQPQAGNL AAAIKFSGQS SKVAQGRGSS GFL

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence

MEVDTLQDAQ ETKNGGNDFK ENGSLDPVVY QLVRVEGDGT LVPPTEDEVL QIEQFLDDKV  60
DLPSIDDVGN VEDFFTNDCM LLKEPDFEEG YSELETNGEI HTQQFDADLE VDRLKPSVDS  120
LDIPSKCTVD HDHKPDKLNT EQGDNNIVHQ DNASTETPKS TVLNDSCSAE KEKTDACSRS  180
VNNSSTGPSV SGVTSSVPDF SILRGEVCLD NLTIRELQEA FRATFGRETT VKDKLWLKRR  240
ITMGLTNSCD VQSSGCVVKD YKIVCKDAKH ELPTIEGIPK AEVEATSLVR YQVLGPGNER  300
DTPSCSYYRS EDQQRSSNRL KGVSTDNDES EGTLQDEQGA AKRLRKPTKR YIEELSDTET  360
LDSTGKLSSP GKRAAHGEVL LRQRVTPLQE VDSLSITYPT RKDTFGGFSV HVPYASRMRR  420
GRPRRNFISF LDDDPPVECP EIQMAVETMS GKDGEHVNHV NSAVEVPLMK NTEKKGGHIE  480
TAEKKGGHIE TADNKEIHSI EADDICRSDA KTKTKRGLKR KHHRAWTLSE VLKLVDGVAQ  540
FGPGKWSEIR RLSFASYSYR TSVDLKDKWR NLIRASQTQL SPENDGVCPR KSNPSIIPVP  600
PAILLRVKEL AELQPQAGNL AAAIKFSGQS SKVAQGRGSS GFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-84	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG065950.4