PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG065130.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 552aa    MW: 61408 Da    PI: 4.4831
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG065130.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS422.53.5e-1291835522374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cA+a+++ +  +aqa+++ l++++s +gdp +R+aay++e+Laar++ s++++ykal++++ +   +  +l+a+++++e++P+++f+
  TRIDC3BG065130.1 183 KQLLFDCATALAEYNVDEAQAIITDLRQMVSIQGDPSHRIAAYLVEGLAARIVASGTGIYKALTCKDPP---TLYQLSAMQILFEICPCYRFG 272
                       589*****************************************************************9...89999**************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +++aN aIlea +geer+HiiDfdi+qG Q+++L+q + + +++p +lRiTgv+++e++      l+ +g+rL+k+Aee+g++fef++ +  +
  TRIDC3BG065130.1 273 FMAANYAILEACKGEERMHIIDFDINQGSQYITLMQFMKDDANKPRHLRITGVDDHETVqrTVGGLKVIGQRLEKLAEECGISFEFRA-LGAD 364
                       *******************************************************9988778889***********************.5999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       + d+++ +L+++pgEal+Vn+++qlh+l+desvs+ +erd++L+++k+l+Pk+v++veq+a++n+++F +rf e  +yysalfdsl+a+lpre
  TRIDC3BG065130.1 365 IGDVTPAMLDCRPGEALVVNFAFQLHHLPDESVSIMNERDQLLRMIKGLQPKLVTLVEQDANTNTAPFQTRFREVYDYYSALFDSLDATLPRE 457
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       s +r++vEr++l+reivn++aceg +r+er e ++kWr+r+++aGF p p+s+++   +++ll+ + ++ y+ ee++g l +gW +++L+++S
  TRIDC3BG065130.1 458 SPDRMNVERQCLAREIVNILACEGPDRVERYEVAGKWRARMTMAGFAPCPFSSSVIGGIRSLLSSYCDR-YKFEEDHGGLHFGWGEKTLIVAS 549
                       *******************************************************************66.*********************** PP

              GRAS 372 aWr 374
                       aW+
  TRIDC3BG065130.1 550 AWQ 552
                       **6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    
MSFVGRVDPS TTYADNIYVH KFGAPNSNFA ARRFGSDTQL FRYGPEPFNS EDYGHMGFPE  60
APSAAFQNSS YNQQASLTPC SDAEKDSPVF SNVSQQNSQS VSDNQSSGLE VEFDDEIRLK  120
LQELEHALLD DGDDILFEIS QVGCISDEWA DPMKDVLLAT SPKESESSIS CAGSNSGEAR  180
TPKQLLFDCA TALAEYNVDE AQAIITDLRQ MVSIQGDPSH RIAAYLVEGL AARIVASGTG  240
IYKALTCKDP PTLYQLSAMQ ILFEICPCYR FGFMAANYAI LEACKGEERM HIIDFDINQG  300
SQYITLMQFM KDDANKPRHL RITGVDDHET VQRTVGGLKV IGQRLEKLAE ECGISFEFRA  360
LGADIGDVTP AMLDCRPGEA LVVNFAFQLH HLPDESVSIM NERDQLLRMI KGLQPKLVTL  420
VEQDANTNTA PFQTRFREVY DYYSALFDSL DATLPRESPD RMNVERQCLA REIVNILACE  480
GPDRVERYEV AGKWRARMTM AGFAPCPFSS SVIGGIRSLL SSYCDRYKFE EDHGGLHFGW  540
GEKTLIVASA WQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein