PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG064950.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 73aa MW: 8088.5 Da PI: 10.2298 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.6 | 2.2e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvtfskR+ng+lKKA+E+SvLCdaev v++fss gkly+++s TRIDC3BG064950.3 9 KRIENQSNRQVTFSKRKNGVLKKAKEISVLCDAEVGVVVFSSAGKLYDFCS 59 79***********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 73 aa Download sequence |
MGRGKIEIKR IENQSNRQVT FSKRKNGVLK KAKEISVLCD AEVGVVVFSS AGKLYDFCSP 60 KTSCVPYLPP FPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.2 | 6e-30 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG064950.3 |