PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG064950.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 292aa MW: 32800 Da PI: 7.5285 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.4 | 4.6e-29 | 92 | 142 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvtfskR+ng+lKKA+E+SvLCdaev v++fss gkly+++s TRIDC3BG064950.2 92 KRIENQSNRQVTFSKRKNGVLKKAKEISVLCDAEVGVVVFSSAGKLYDFCS 142 79***********************************************96 PP | |||||||
2 | K-box | 72.5 | 1.2e-24 | 154 | 248 | 1 | 95 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 yq++sgk l+++k++sl+ e++++kke++n+q e+Rhl+GedL+sL+ keL +e++L+++l++ +k++e++ + +++ ++ e+e++ + TRIDC3BG064950.2 154 YQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGLTSLHEKQMEHYDRLVKHGKMLEDENKLLAFK 246 79999999*************************************************************************999999877666 PP K-box 94 Lr 95 + TRIDC3BG064950.2 247 VH 248 65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
PSQAKQTEPL PFPAPTPEPP RKPPHHHSSS SHGGLLYSSS SSFPTPTPTT TAIPQSHHAR 60 TGPQSARRNE PFLAPPEEEE GGGMGRGKIE IKRIENQSNR QVTFSKRKNG VLKKAKEISV 120 LCDAEVGVVV FSSAGKLYDF CSPKTSLSRI LEKYQTNSGK ILWDEKHKSL SAEIDRIKKE 180 NDNMQIELRH LKGEDLNSLQ PKELIMIEEA LDNGLTSLHE KQMEHYDRLV KHGKMLEDEN 240 KLLAFKVHQH DIALSGSMRD LELGYHPDRD FAAQMPITFR VQPSHPNLQE DS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 7e-63 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG064950.2 |