PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG064730.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 433aa MW: 48019.7 Da PI: 5.1341

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG064730.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	105.9	3.2e-33	41	131	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+++++++sws+ +ns+vv+d ++f++ +Lp++Fkhsnf+SFv+QLn+YgF+kv+ ++ weF+++ F +g+++ll TRIDC3BG064730.1 41 FLTKTYDMVDDRSTDDVVSWSAGNNSLVVWDLHHFSTVLLPRHFKHSNFSSFVKQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLL 124 9**************************************************************999.........************ PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 ++i+r++ TRIDC3BG064730.1 125 KNIRRRR 131 ***97 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MDPMPTLVKE EEDGHGTGES PGATAASRPV KGLRDARPSL FLTKTYDMVD DRSTDDVVSW 60 SAGNNSLVVW DLHHFSTVLL PRHFKHSNFS SFVKQLNTYG FRKVDPDRWE FANEGFLRGQ 120 RHLLKNIRRR RPPANTASNQ QSLGSYLEVG HFGNHTDTDQ LKRDKQLLMA EVVKLRQEQQ 180 SMKTHLKGME ERLHGTERKQ QQMTAFLARV FQKPELLKQL ISLNGVRKEL HDAMSKKRRR 240 SIGQGPEADD MGASGSLEQE SPVLSDPHES VELLGEGSVE LLADGVPSEL ESSTALLADG 300 IPPDLEGAAE LLVDVIPSDL NDSGVDTNGV KPQDFGLGTC EVQQNRAQGA LHDDFWEELM 360 SRALSGEDDN PVNVDDMDVL SEKTDFLVPN NVRGAVAREP AGQRYGWHNF CVDNALNVAC 420 LLARSGTVQL PLL

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MDPMPTLVKE EEDGHGTGES PGATAASRPV KGLRDARPSL FLTKTYDMVD DRSTDDVVSW  60
SAGNNSLVVW DLHHFSTVLL PRHFKHSNFS SFVKQLNTYG FRKVDPDRWE FANEGFLRGQ  120
RHLLKNIRRR RPPANTASNQ QSLGSYLEVG HFGNHTDTDQ LKRDKQLLMA EVVKLRQEQQ  180
SMKTHLKGME ERLHGTERKQ QQMTAFLARV FQKPELLKQL ISLNGVRKEL HDAMSKKRRR  240
SIGQGPEADD MGASGSLEQE SPVLSDPHES VELLGEGSVE LLADGVPSEL ESSTALLADG  300
IPPDLEGAAE LLVDVIPSDL NDSGVDTNGV KPQDFGLGTC EVQQNRAQGA LHDDFWEELM  360
SRALSGEDDN PVNVDDMDVL SEKTDFLVPN NVRGAVAREP AGQRYGWHNF CVDNALNVAC  420
LLARSGTVQL PLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	131	RGQRHLLKNIRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	3e-85	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG064730.1