PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG062990.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 621aa MW: 66133.6 Da PI: 10.1845

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG062990.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35	3.5e-11	262	318	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g TRIDC3BG062990.2 262 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 318 57*****************4444.2455535555.779999************98 PP
2	AP2	46.9	6.9e-15	361	412	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TRIDC3BG062990.2 361 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 412 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 621 aa Download sequence
MATVNNWLGF SLSPQELPPS AAASGDVSGA DVCYNIPQDW NMRGSELSAL VAEPKLEDFL 60 GGISYSDHHH HQHKQPGGNN MVVPAGSASG GAACYANSGG SSVGYLYHPS SASLQFADSV 120 MVASSGGGVH HDGAGIMANT TANGDLNGGG GGGIGLSMIK SWLRSQPSPA QAQPPEQQRA 180 EAAAQGLSLS MNMAACIPPL VGGERGVPEL AIVRKDDTAG GSSAGSGAVV SAGADSTGGS 240 SGAVVETPAS RKTADTFGQR TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ TRKGRQGGYD 300 KEEKAARAYD LAALKYWGAT TTTNFPVNNY EKELDEMKHM TRQEFVASLR RKSSGFSRGA 360 SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGLNAVTNFD 420 MTRYDVKSIL DSTALPIGSA AKRLKDKEAA TASSLALQQQ QHAGVVSGYD MGALAAYGAA 480 YHHHHPSVGF RRRWWTHVPP LRPCAAAARV VQAGAGPRGD RGRAQPAGAP PPQPRRRWRR 540 TRLLLAACPG DAAAAWRPWQ HRQRGRRLAG AQHWLQLRSV QQRRGRELYA ANEHHHHCGG 600 EPRPRAGGSA CPRTGGGGTG V

Sequence ? help Back to Top

Protein Sequence Length: 621 aa Download sequence

MATVNNWLGF SLSPQELPPS AAASGDVSGA DVCYNIPQDW NMRGSELSAL VAEPKLEDFL  60
GGISYSDHHH HQHKQPGGNN MVVPAGSASG GAACYANSGG SSVGYLYHPS SASLQFADSV  120
MVASSGGGVH HDGAGIMANT TANGDLNGGG GGGIGLSMIK SWLRSQPSPA QAQPPEQQRA  180
EAAAQGLSLS MNMAACIPPL VGGERGVPEL AIVRKDDTAG GSSAGSGAVV SAGADSTGGS  240
SGAVVETPAS RKTADTFGQR TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ TRKGRQGGYD  300
KEEKAARAYD LAALKYWGAT TTTNFPVNNY EKELDEMKHM TRQEFVASLR RKSSGFSRGA  360
SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGLNAVTNFD  420
MTRYDVKSIL DSTALPIGSA AKRLKDKEAA TASSLALQQQ QHAGVVSGYD MGALAAYGAA  480
YHHHHPSVGF RRRWWTHVPP LRPCAAAARV VQAGAGPRGD RGRAQPAGAP PPQPRRRWRR  540
TRLLLAACPG DAAAAWRPWQ HRQRGRRLAG AQHWLQLRSV QQRRGRELYA ANEHHHHCGG  600
EPRPRAGGSA CPRTGGGGTG V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-116	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG062990.2