PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG062990.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 615aa MW: 64537.3 Da PI: 7.9405

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG062990.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.6	8.5e-15	221	280	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g TRIDC3BG062990.1 221 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 280 57*****************666664478446***********************98 PP
2	AP2	46.9	6.8e-15	323	374	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TRIDC3BG062990.1 323 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 374 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 615 aa Download sequence
MRGSELSALV AEPKLEDFLG GISYSDHHHH QHKQPGGNNM VVPAGSASGG AACYANSGGS 60 SVGYLYHPSS ASLQFADSVM VASSGGGVHH DGAGIMANTT ANGDLNGGGG GGIGLSMIKS 120 WLRSQPSPAQ AQPPEQQRAE AAAQGLSLSM NMAACIPPLV GGERGVPELA IVRKDDTAGG 180 SSAGSGAVVS AGADSTGGSS GAVVETPASR KTADTFGQRT SIYRGVTRHR WTGRYEAHLW 240 DNSCRREGQT RKGRQVYLGG YDKEEKAARA YDLAALKYWG ATTTTNFPVN NYEKELDEMK 300 HMTRQEFVAS LRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE 360 AAEAYDIAAI KFRGLNAVTN FDMTRYDVKS ILDSTALPIG SAAKRLKDKE AATASSLALQ 420 QQQHAGVVSG YDMGALAAYG AAYHHHHPSV AGAVAWPTIA FQTPPQQVSG GGGGHMYHPY 480 AHAQPLRGWC KQEPDHAVIA AAHSLQELHH LNLGAGGGAH DFFSQHAQAM QQQHGGLGSI 540 DNGAGASLEH STGSNSVVYN NGAVESYMLP MSTTTTAAVS HAHEQAAAHA HARAVAAQAY 600 SGGNMSRDHD DGKIA

Sequence ? help Back to Top

Protein Sequence Length: 615 aa Download sequence

MRGSELSALV AEPKLEDFLG GISYSDHHHH QHKQPGGNNM VVPAGSASGG AACYANSGGS  60
SVGYLYHPSS ASLQFADSVM VASSGGGVHH DGAGIMANTT ANGDLNGGGG GGIGLSMIKS  120
WLRSQPSPAQ AQPPEQQRAE AAAQGLSLSM NMAACIPPLV GGERGVPELA IVRKDDTAGG  180
SSAGSGAVVS AGADSTGGSS GAVVETPASR KTADTFGQRT SIYRGVTRHR WTGRYEAHLW  240
DNSCRREGQT RKGRQVYLGG YDKEEKAARA YDLAALKYWG ATTTTNFPVN NYEKELDEMK  300
HMTRQEFVAS LRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE  360
AAEAYDIAAI KFRGLNAVTN FDMTRYDVKS ILDSTALPIG SAAKRLKDKE AATASSLALQ  420
QQQHAGVVSG YDMGALAAYG AAYHHHHPSV AGAVAWPTIA FQTPPQQVSG GGGGHMYHPY  480
AHAQPLRGWC KQEPDHAVIA AAHSLQELHH LNLGAGGGAH DFFSQHAQAM QQQHGGLGSI  540
DNGAGASLEH STGSNSVVYN NGAVESYMLP MSTTTTAAVS HAHEQAAAHA HARAVAAQAY  600
SGGNMSRDHD DGKIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-122	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG062990.1