PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG062450.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 535aa MW: 59308 Da PI: 5.484 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 79.4 | 4.3e-25 | 141 | 195 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+G + Pk+il+lm+v+gLt+e+v+SHLQkYRl TRIDC3BG062450.2 141 KARVVWSVDLHQKFVNAVNQIGFDSEVGPKKILDLMNVPGLTRENVASHLQKYRL 195 68*******************99999****************************8 PP | |||||||
2 | Myb_DNA-binding | 40.4 | 6.9e-13 | 143 | 194 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ g+t++++ s++qky+ TRIDC3BG062450.2 143 RVVWSVDLHQKFVNAVNQIGFDsevGPKKILDLMNvPGLTRENVASHLQKYR 194 678************************************************7 PP | |||||||
3 | Response_reg | 63.4 | 1.1e-21 | 2 | 97 | 14 | 109 |
HHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--H CS Response_reg 14 lrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdp 104 l+++l+k y ev+++ ++ ale+l+e++ +D+++ D++mp+mdG++ll++i e +lp+i+++ ge + + + ++ Ga d+l Kp+ + TRIDC3BG062450.2 2 LEKMLRKCSY-EVTTCGLARVALEILRERKnrFDIVISDVNMPDMDGFKLLEHIGLEM-DLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRM 92 78999999**.***************877778**********************6654.8********************************* PP HHHHH CS Response_reg 105 eelvk 109 +el++ TRIDC3BG062450.2 93 KELRN 97 **987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 535 aa Download sequence |
ILEKMLRKCS YEVTTCGLAR VALEILRERK NRFDIVISDV NMPDMDGFKL LEHIGLEMDL 60 PVIMMSIDGE TSRVMKGVQH GACDYLLKPV RMKELRNIWQ HVYRKKMHEV KEIEVDSDAT 120 RKRKDVDHGD QDSSDGATAK KARVVWSVDL HQKFVNAVNQ IGFDSEVGPK KILDLMNVPG 180 LTRENVASHL QKYRLYLGRL QKQNEERLLG SARQDFSTKG PSSENLNLRS SFQEQPSNTS 240 SGYPHASQKI QGQSSVSDSQ LEETKRMVPL PAPDRSMNSV SSAAEPQNVA GVSPIGGVLS 300 FKGLPVNQDR KPSETMILEC QAWTGGVPAK QFMQYPKHNH ARCDLLGDYA CLPKPDLEHP 360 TAPGHLFTPP PLISMSCSTE MDARNFSDVK PALVDCIKSF SPALTCTADS VSVQISDSVV 420 TSTDAADRKF SSVEGLPTTK DCYFGQTSNQ GSWLRSQEEP SIICGADFAS LPEDLPGYPL 480 QGGVSFENVG LSSIDLFHYN DAMILSGLQS NWYDDQDHFS SETTDYPLMD GCLFA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 104 | 124 | RKKMHEVKEIEVDSDATRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-100 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG062450.2 |