PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG062450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 571aa MW: 63478.7 Da PI: 5.1891 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 81.7 | 8.2e-26 | 178 | 231 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+gLt+e+v+SHLQkYRl TRIDC3BG062450.1 178 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVPGLTRENVASHLQKYRL 231 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 40.4 | 6.6e-13 | 180 | 230 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ g+t++++ s++qky+ TRIDC3BG062450.1 180 RVVWSVDLHQKFVNAVNQIGFDkvGPKKILDLMNvPGLTRENVASHLQKYR 230 678***********************************************7 PP | |||||||
3 | Response_reg | 78.9 | 1.8e-26 | 1 | 108 | 2 | 109 |
EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHT CS Response_reg 2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealka 92 l+vdD+p+ +++l+++l+k y ev+++ ++ ale+l+e++ +D+++ D++mp+mdG++ll++i e +lp+i+++ ge + + + ++ TRIDC3BG062450.1 1 LVVDDDPTWLKILEKMLRKCSY-EVTTCGLARVALEILRERKnrFDIVISDVNMPDMDGFKLLEHIGLEM-DLPVIMMSIDGETSRVMKGVQH 91 79********************.***************877778**********************6654.8********************* PP TESEEEESS--HHHHHH CS Response_reg 93 GakdflsKpfdpeelvk 109 Ga d+l Kp+ ++el++ TRIDC3BG062450.1 92 GACDYLLKPVRMKELRN 108 **************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 571 aa Download sequence |
LVVDDDPTWL KILEKMLRKC SYEVTTCGLA RVALEILRER KNRFDIVISD VNMPDMDGFK 60 LLEHIGLEMD LPVIMMSIDG ETSRVMKGVQ HGACDYLLKP VRMKELRNIW QHVYRKKMHE 120 VKEIEGHDSC DDLQILRYGF EGFDEKGLFM TVDSDATRKR KDVDHGDQDS SDGATAKKAR 180 VVWSVDLHQK FVNAVNQIGF DKVGPKKILD LMNVPGLTRE NVASHLQKYR LYLGRLQKQN 240 EERLLGSARQ DFSTKGPSSE NLNLRSSFQE QPSNTSSGYP HASQKIQGQS SVSDSQLEET 300 KRMVPLPAPD RSMNSVSSAA EPQNVAGVSP IGGVLSFKGL PVNQDRKPSE TMILECQAWT 360 GGVPAKQFMQ YPKHNHARCD LLGDYACLPK PDLEHPTAPG HLFTPPPLIS MSCSTEMDAR 420 NFSDVKPALV DCIKSFSPAL TCTADSVSVQ ISDSVVTSTD AADRKFSSVE GLPTTKDCYF 480 GQTSNQGSWL RSQEEPSIIC GADFASLPED LPGYPLQGGV SFENVGLSSI DLFHYNDAMI 540 LSGLQSNWYD DQDHFSSETT DYPLMDGCLF A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-109 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG062450.1 |