PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG059120.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 358aa MW: 38706.7 Da PI: 7.0544 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.6 | 3.8e-15 | 47 | 92 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v + G ++W+ Iar ++ gR++k+c++rw + TRIDC3BG059120.3 47 KGPWSPEEDAVLTNLVMRDGARNWTMIARGIP-GRSGKSCRLRWCNQ 92 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 55 | 1.8e-17 | 99 | 143 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T+eEd+ ++ a++ +G++ W++Ia+ + gRt++ +k++w++ TRIDC3BG059120.3 99 RKPFTEEEDQMIISAHAIHGNK-WASIAKLLV-GRTDNAIKNHWNST 143 789*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence |
MSSETAVSPQ PLSSSPPTAA VSAHSGPAPP ADEPEAPAPP QPPERVKGPW SPEEDAVLTN 60 LVMRDGARNW TMIARGIPGR SGKSCRLRWC NQLDPQLKRK PFTEEEDQMI ISAHAIHGNK 120 WASIAKLLVG RTDNAIKNHW NSTLRRRYCT GTRCTRSASA EQPMREMSRA VSEERWPLSG 180 PSSFSVMEVK EAPVQTVSES SAGALQIRDI NNCSTEAVDR SYPVRPVATV GAFRPYSLGP 240 VQQMQMEMSS STKFVPTIQA LTPEIAVSKF ADTTCFAADV PNKCGHGCCS AEEQPRNNSL 300 LGPEFKEFID HPPILSSSFA SLVSEISSIA WMNGGLQSSN SGNLVQSNPP APDKLGIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G55730.1 | 7e-75 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG059120.3 |