PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG059120.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 268aa    MW: 28960.6 Da    PI: 6.5036
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG059120.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.87e-151453647
                      HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +eEd+ ++ a++ +G++ W++Ia+ +  gRt++ +k++w++ 
  TRIDC3BG059120.2 14 EEEDQMIISAHAIHGNK-WASIAKLLV-GRTDNAIKNHWNST 53
                      7****************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
TSSILNSSAS HSLEEEDQMI ISAHAIHGNK WASIAKLLVG RTDNAIKNHW NSTLRRRYCT  60
GTRCTRSASA EQPMREMSRA VSEERWPLSG PSSFSVMEVK EAPVQTVSES SAGALQIRDI  120
NNCSTEAVDR SYPVRPVATV GAFRPYSLGP VQQMQMEMSS STKFVPTIQA LTPEIAVSKF  180
ADTTCFAADV PNKCGHGCCS AEEQPRNNSL LGPEFKEFID HPPILSSSFA SLVSEISSIA  240
WMNGGLQSSN SGNLVQSNPP APDKLGIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.11e-35MYB family protein