PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG059120.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 376aa MW: 40547.5 Da PI: 6.1724

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG059120.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.5	4e-15	65	110	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v + G ++W+ Iar ++ gR++k+c++rw + TRIDC3BG059120.1 65 KGPWSPEEDAVLTNLVMRDGARNWTMIARGIP-GRSGKSCRLRWCNQ 110 79****************************.*********985 PP
2	Myb_DNA-binding	54.9	2e-17	117	161	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T+eEd+ ++ a++ +G++ W++Ia+ + gRt++ +k++w++ TRIDC3BG059120.1 117 RKPFTEEEDQMIISAHAIHGNK-WASIAKLLV-GRTDNAIKNHWNST 161 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
PPQPQMHQPA SPSPSSAEPQ TPVQPQPNHS SPPLSGDDDD EDVVITGALS GAGGAASSAA 60 DERVKGPWSP EEDAVLTNLV MRDGARNWTM IARGIPGRSG KSCRLRWCNQ LDPQLKRKPF 120 TEEEDQMIIS AHAIHGNKWA SIAKLLVGRT DNAIKNHWNS TLRRRYCTGT RCTRSASAEQ 180 PMREMSRAVS EERWPLSGPS SFSVMEVKEA PVQTVSESSA GALQIRDINN CSTEAVDRSY 240 PVRPVATVGA FRPYSLGPVQ QMQMEMSSST KFVPTIQALT PEIAVSKFAD TTCFAADVPN 300 KCGHGCCSAE EQPRNNSLLG PEFKEFIDHP PILSSSFASL VSEISSIAWM NGGLQSSNSG 360 NLVQSNPPAP DKLGIV

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

PPQPQMHQPA SPSPSSAEPQ TPVQPQPNHS SPPLSGDDDD EDVVITGALS GAGGAASSAA  60
DERVKGPWSP EEDAVLTNLV MRDGARNWTM IARGIPGRSG KSCRLRWCNQ LDPQLKRKPF  120
TEEEDQMIIS AHAIHGNKWA SIAKLLVGRT DNAIKNHWNS TLRRRYCTGT RCTRSASAEQ  180
PMREMSRAVS EERWPLSGPS SFSVMEVKEA PVQTVSESSA GALQIRDINN CSTEAVDRSY  240
PVRPVATVGA FRPYSLGPVQ QMQMEMSSST KFVPTIQALT PEIAVSKFAD TTCFAADVPN  300
KCGHGCCSAE EQPRNNSLLG PEFKEFIDHP PILSSSFASL VSEISSIAWM NGGLQSSNSG  360
NLVQSNPPAP DKLGIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	2e-74	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG059120.1