PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG058440.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 615aa    MW: 69414 Da    PI: 7.1451
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG058440.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS377.61.6e-1152416102374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cA+ vs +d + a+ lL++++++as +gd  qRla++f+++L+arla+++s++yk  + s+ +    ++ l+a++l+  ++P+ k+s
  TRIDC3BG058440.4 241 ETLLIHCAQSVSIDDRRSATDLLKQIRQHASANGDGDQRLAHCFANGLEARLAGNGSQIYKLHTISRFA---CADILKAYQLYLAACPFKKIS 330
                       789**********************************************************99999999...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       h  aNq+I++ave++++vHi+Df++ +G+QWp+L+q L++Rp+gpp+lRiT+++ p++g   +e++ee+g+ L+++A++++vpf+++  +a++
  TRIDC3BG058440.4 331 HYFANQTIMNAVEKAKKVHIVDFGVYYGFQWPCLIQRLSKRPGGPPELRITAIDTPQPGfrPAERIEEIGRYLSDYAQTFKVPFKYHG-IASQ 422
                       ****************************************************************************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e++++e+L ++++E l+Vn++++ ++l+desv  es+r+ vL+++++++P+v+++   + ++n++ F+ rf eal  +sa fd+lea++pr+
  TRIDC3BG058440.4 423 FEAVRVEDLPIEKDEILIVNSMFRFKTLMDESVVAESPRNMVLNTIRKMKPHVFIHGVTNGSYNAPFFVSRFREALFQFSAHFDMLEANIPRD 515
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       +eer  +E  +++re+ nv++ceg er er et+++W+ r ++aGFk++pl+++++k a+  ++ ++++ + ++e++g+l++gWk+r L+++S
  TRIDC3BG058440.4 516 NEERLLIESTIFSREAINVISCEGMERMERPETYKQWQVRNQRAGFKQLPLDQEIMKRAREKVKCYHKN-FIIDEDNGWLLQGWKGRILYALS 607
                       ****************************************************************99966.*********************** PP

              GRAS 372 aWr 374
                        W+
  TRIDC3BG058440.4 608 TWK 610
                       **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 615 aa     Download sequence    
ALEFPTAEFL QPPQFYQDLS PESCVVEAGG AWPYDAMEFN PLPDALLSQS SSFASSNGSS  60
VAFSEGFEPW LSTAGAVPDA GLSDFVLQSQ QAAQFSRGFE EGSRFLPQES KLVIDVDSLP  120
SVWVKEDKKV VEVKREKADA EVAIHRGKKH FYGDDLDADE VRCCKHSAPV VDADHLVREM  180
MDKVLLCNGE TCSRGVKELR EALQHDVAAH SGGAHGKGSG HGKGRGKKQV KQPKKEVVDL  240
ETLLIHCAQS VSIDDRRSAT DLLKQIRQHA SANGDGDQRL AHCFANGLEA RLAGNGSQIY  300
KLHTISRFAC ADILKAYQLY LAACPFKKIS HYFANQTIMN AVEKAKKVHI VDFGVYYGFQ  360
WPCLIQRLSK RPGGPPELRI TAIDTPQPGF RPAERIEEIG RYLSDYAQTF KVPFKYHGIA  420
SQFEAVRVED LPIEKDEILI VNSMFRFKTL MDESVVAESP RNMVLNTIRK MKPHVFIHGV  480
TNGSYNAPFF VSRFREALFQ FSAHFDMLEA NIPRDNEERL LIESTIFSRE AINVISCEGM  540
ERMERPETYK QWQVRNQRAG FKQLPLDQEI MKRAREKVKC YHKNFIIDED NGWLLQGWKG  600
RILYALSTWK ANPQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-164GRAS family protein