PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG058370.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 290aa MW: 32473.7 Da PI: 9.802

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG058370.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.9	1.8e-16	66	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT +Ede l +av+ + g++Wk+Ia+ ++ Rt+ qc +rwqk+l TRIDC3BG058370.2 66 KGGWTLQEDETLRKAVETFNGRSWKKIAEFFP-DRTEVQCLHRWQKVL 112 688***************************.**********986 PP
2	Myb_DNA-binding	65	1.4e-20	118	164	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++d+vk++G+ W+ Iar ++ gR +kqc++rw+++l TRIDC3BG058370.2 118 KGPWTQEEDDKIIDLVKKYGPTKWSVIARSLP-GRIGKQCRERWHNHL 164 79****************************.***********97 PP
3	Myb_DNA-binding	61.9	1.4e-19	170	213	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT+eE++ l++a++++G++ W+ Ia+ ++ gRt++++k++w++ TRIDC3BG058370.2 170 KDAWTAEEEQALINAHREYGNK-WAEIAKVLP-GRTDNSIKNHWNS 213 689*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MGAMAEAEHE GCVENRQPLA ASSESVSEGS SYGGAGGPAR MSPPVSGSVN SISGLRRTSG 60 PIRRAKGGWT LQEDETLRKA VETFNGRSWK KIAEFFPDRT EVQCLHRWQK VLNPELIKGP 120 WTQEEDDKII DLVKKYGPTK WSVIARSLPG RIGKQCRERW HNHLNPDIRK DAWTAEEEQA 180 LINAHREYGN KWAEIAKVLP GRTDNSIKNH WNSSLRKKLD VYGTRNILAI PRLVGHDDFK 240 DKQKPVASEG HLDLNTVPGI TSKNLTGSCQ GRLRVPIHFF FTNCAATNFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-110	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG058370.2