PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG058370.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 581aa MW: 63446.1 Da PI: 8.3981

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG058370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.5	4.7e-16	66	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT +Ede l +av+ + g++Wk+Ia+ ++ Rt+ qc +rwqk+l TRIDC3BG058370.1 66 KGGWTLQEDETLRKAVETFNGRSWKKIAEFFP-DRTEVQCLHRWQKVL 112 688***************************.**********986 PP
2	Myb_DNA-binding	63.6	3.7e-20	118	164	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++d+vk++G+ W+ Iar ++ gR +kqc++rw+++l TRIDC3BG058370.1 118 KGPWTQEEDDKIIDLVKKYGPTKWSVIARSLP-GRIGKQCRERWHNHL 164 79****************************.***********97 PP
3	Myb_DNA-binding	60.5	3.5e-19	170	213	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT+eE++ l++a++++G++ W+ Ia+ ++ gRt++++k++w++ TRIDC3BG058370.1 170 KDAWTAEEEQALINAHREYGNK-WAEIAKVLP-GRTDNSIKNHWNS 213 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MGAMAEAEHE GCVENRQPLA ASSESVSEGS SYGGAGGPAR MSPPVSGSVN SISGLRRTSG 60 PIRRAKGGWT LQEDETLRKA VETFNGRSWK KIAEFFPDRT EVQCLHRWQK VLNPELIKGP 120 WTQEEDDKII DLVKKYGPTK WSVIARSLPG RIGKQCRERW HNHLNPDIRK DAWTAEEEQA 180 LINAHREYGN KWAEIAKVLP GRTDNSIKNH WNSSLRKKLD VYGTRNILAI PRLVGHDDFK 240 DKQKPVASEG HLDLNTVPGI TSKNLPEIAH HSNFSSHLQS YKLDHAKAGS GFLSISFLPT 300 VQPLTSSEVS SVVNGSAVTL AAQGLESDSV RDKALEIVSV HEKGLKVDST LDTLREPGST 360 QLEAVPAKGE ESSLKNDAQS SLGPLCYQIP NMNDVAPASS SLFSEHQTVH QTSEHCRNGA 420 LSPNGCTTPT KGTMSVQLSV DSILKIAADS FPVTPSILRR RKRERPTPAS DLKFGEPNTD 480 SFYTPAGKRP TTDTPESFRT ASFLSLGSLD GLSSSARGFD VSPPYRIRAK RMCLTKAVEK 540 QLDFSSNGLG TCGSEVLNSP HQNSQSTHSL GEASIMKEKE L

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MGAMAEAEHE GCVENRQPLA ASSESVSEGS SYGGAGGPAR MSPPVSGSVN SISGLRRTSG  60
PIRRAKGGWT LQEDETLRKA VETFNGRSWK KIAEFFPDRT EVQCLHRWQK VLNPELIKGP  120
WTQEEDDKII DLVKKYGPTK WSVIARSLPG RIGKQCRERW HNHLNPDIRK DAWTAEEEQA  180
LINAHREYGN KWAEIAKVLP GRTDNSIKNH WNSSLRKKLD VYGTRNILAI PRLVGHDDFK  240
DKQKPVASEG HLDLNTVPGI TSKNLPEIAH HSNFSSHLQS YKLDHAKAGS GFLSISFLPT  300
VQPLTSSEVS SVVNGSAVTL AAQGLESDSV RDKALEIVSV HEKGLKVDST LDTLREPGST  360
QLEAVPAKGE ESSLKNDAQS SLGPLCYQIP NMNDVAPASS SLFSEHQTVH QTSEHCRNGA  420
LSPNGCTTPT KGTMSVQLSV DSILKIAADS FPVTPSILRR RKRERPTPAS DLKFGEPNTD  480
SFYTPAGKRP TTDTPESFRT ASFLSLGSLD GLSSSARGFD VSPPYRIRAK RMCLTKAVEK  540
QLDFSSNGLG TCGSEVLNSP HQNSQSTHSL GEASIMKEKE L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-108	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG058370.1