PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG057180.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 148aa    MW: 16596.2 Da    PI: 5.7763
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG057180.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB179.92.3e-5615108194
              NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 
                        vreqdrflPian+srimkk++Pan+ki+kdaket+qecvsefisfvtseasdkcq+ekrktingddllwa+atlGfe+yv+plk+yl+kyr+
  TRIDC3BG057180.12  15 VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYVDPLKIYLQKYRD 106
                        69*****************************************************************************************9 PP

              NF-YB  93 le 94 
                        + 
  TRIDC3BG057180.12 107 VI 108
                        85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MADDDSGSPR GGGGVREQDR FLPIANISRI MKKAVPANGK IAKDAKETLQ ECVSEFISFV  60
TSEASDKCQK EKRKTINGDD LLWAMATLGF EEYVDPLKIY LQKYRDVIMA LAHYQYLLQM  120
TIILLFCISH LTSLLLCLPC NFLDGRGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.18e-60NF-YB family protein