PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG057180.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 136aa    MW: 15007.1 Da    PI: 8.6853
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG057180.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB179.52.9e-5623115193
              NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 
                        vreqdrflPian+srimkk++Pan+ki+kdaket+qecvsefisfvtseasdkcq+ekrktingddllwa+atlGfe+yv+plk+yl+kyr+
  TRIDC3BG057180.10  23 VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYVDPLKIYLQKYRD 114
                        69*****************************************************************************************9 PP

              NF-YB  93 l 93 
                        +
  TRIDC3BG057180.10 115 F 115
                        6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
GSRVSGRGMA DDDSGSPRGG GGVREQDRFL PIANISRIMK KAVPANGKIA KDAKETLQEC  60
VSEFISFVTS EASDKCQKEK RKTINGDDLL WAMATLGFEE YVDPLKIYLQ KYRDFPLSPS  120
FNITTKALDP AYLGRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.11e-59NF-YB family protein