PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG056310.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 560aa MW: 59736.9 Da PI: 6.6824

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG056310.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.8	2e-32	218	274	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkve+s +++++ei+Y+g+Hnh TRIDC3BG056310.1 218 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVETSL-EGQITEIVYKGTHNHA 274 8**************************************.*************7 PP
2	WRKY	104.9	4.3e-33	381	439	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d ++v++tYeg+Hnh+ TRIDC3BG056310.1 381 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERASHDLRAVITTYEGKHNHD 439 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MTTSSSGSVE TSANSRPGSF SFGSASFTEM LGGSAAAGGA SGYKALTPPS LPLSPSLMSP 60 SSFFNMPAGM NLADFLDSPV LLTSSIFPSP TTGAFGSQFN WRPEAPMPSA AEQGGKEEQR 120 QPYSDFSFQT APANSEEAAR ATTTTTSLQP PVAVASQGEE AYTGQQQQAW GYGQQQEGMN 180 ASAANPASFS APALQATSSE MAPAGAYRQT HSQRRSSDDG YNWRKYGQKQ VKGSENPRSY 240 YKCTFPNCPT KKKVETSLEG QITEIVYKGT HNHAKPLNTR RGSGGGAAAA QVLQSGGDAS 300 ENSFGAMVTT PENSSASFGD DENGVSSPRS GNVGRNDNDD DEPDSKRRRD GGDGEGINMA 360 GNRTVREPRV VVQTMSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTV GCPVRKHVER 420 ASHDLRAVIT TYEGKHNHDV PAARGSAALY RPAPRAADST ASTGHYLNPQ PSAMAYQASA 480 APAVTGTQQY APRPDGFGGQ NQGSFGFNGN FGFSGPGFDN PTASYMSQHQ QQQRQNDAMH 540 ASSAKEEPRE EDMFFQNSQY

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MTTSSSGSVE TSANSRPGSF SFGSASFTEM LGGSAAAGGA SGYKALTPPS LPLSPSLMSP  60
SSFFNMPAGM NLADFLDSPV LLTSSIFPSP TTGAFGSQFN WRPEAPMPSA AEQGGKEEQR  120
QPYSDFSFQT APANSEEAAR ATTTTTSLQP PVAVASQGEE AYTGQQQQAW GYGQQQEGMN  180
ASAANPASFS APALQATSSE MAPAGAYRQT HSQRRSSDDG YNWRKYGQKQ VKGSENPRSY  240
YKCTFPNCPT KKKVETSLEG QITEIVYKGT HNHAKPLNTR RGSGGGAAAA QVLQSGGDAS  300
ENSFGAMVTT PENSSASFGD DENGVSSPRS GNVGRNDNDD DEPDSKRRRD GGDGEGINMA  360
GNRTVREPRV VVQTMSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTV GCPVRKHVER  420
ASHDLRAVIT TYEGKHNHDV PAARGSAALY RPAPRAADST ASTGHYLNPQ PSAMAYQASA  480
APAVTGTQQY APRPDGFGGQ NQGSFGFNGN FGFSGPGFDN PTASYMSQHQ QQQRQNDAMH  540
ASSAKEEPRE EDMFFQNSQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-97	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG056310.1