PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG056180.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 251aa MW: 26559.1 Da PI: 6.4153 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 130.7 | 6e-41 | 62 | 161 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +CaaCk+lrr+Ca++C++apyf ++p+kfa+vhk+FGasnv+k+l ++pe er da+sslvyeA+ r+rdPvyG++g i+ lqqq++ l+ae TRIDC3BG056180.2 62 PCAACKLLRRRCAHECPFAPYFSPHEPHKFAAVHKVFGASNVSKMLLEVPEPERADAASSLVYEANLRLRDPVYGCMGAISMLQQQVNALEAE 154 7******************************************************************************************** PP DUF260 94 lallkee 100 l+++++e TRIDC3BG056180.2 155 LQAVRAE 161 **99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MIFWTSTRER LDEIGKKIKR EPDPASAIAG VVVAVSQTEH HVPRRLGLVG PGIGGAANIA 60 TPCAACKLLR RRCAHECPFA PYFSPHEPHK FAAVHKVFGA SNVSKMLLEV PEPERADAAS 120 SLVYEANLRL RDPVYGCMGA ISMLQQQVNA LEAELQAVRA EIFKHRYRQT GVGVGVGAAN 180 LIVDDDVSAA AAGGFMAPAT SLVHTAGVVS VAEAGQEVDT MPSTATAYAA GQPSSTDYSS 240 LDTSEHDAYF G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40470.1 | 3e-65 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG056180.2 |