PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG055830.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 269aa    MW: 29186.6 Da    PI: 7.2915
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG055830.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.53.7e-25104162258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnh 58 
                        Dg+ WrKYGqK+++gs++pr YYrC+++  gC ++++v+rs+e+p +++i Y geH++
  TRIDC3BG055830.1 104 ADGFVWRKYGQKDINGSNHPRLYYRCAFRgeGCAATRRVQRSQEEPAAFVIAYYGEHTC 162
                       6***************************9999*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MALATPTAVV LELMTMGQQS AAHLGDLLRA ASPPVRAEHQ ALAAEILRCC DRVIAAVSAG  60
ASDKKRKMTD PGATTCHPPA AAMPSKRRVR GAEAHREVHA DTTADGFVWR KYGQKDINGS  120
NHPRLYYRCA FRGEGCAATR RVQRSQEEPA AFVIAYYGEH TCGAAFSQQR AEPQPPTVVD  180
SGSNAWGVFG AVDRNRGSPL MPSLAAEHDV RRHGEAPRDT SQRWSSPSSS SSYSEVELGA  240
SPVEGFLDGN FDWEWETVVN SLRFGDLLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.19e-21WRKY family protein