PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG055730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 199aa MW: 21455.7 Da PI: 6.8587 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 76.6 | 3e-24 | 11 | 72 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 +Dg++WrKYGqK+++g+ fpr YYrCt++ gC++ k+ve+ + dp ++ ++Y+++H+++ TRIDC3BG055730.1 11 HDGFQWRKYGQKVIRGNAFPRCYYRCTYHqdhGCSASKHVEQHnSADPPLFRVVYTNDHTCS 72 7***************************98999*******986157**************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MRTDYTYAPY HDGFQWRKYG QKVIRGNAFP RCYYRCTYHQ DHGCSASKHV EQHNSADPPL 60 FRVVYTNDHT CSGAAASASD YMASSMQIQQ IADASLRKAD TEAERPPRPQ QPRSGGSYAA 120 AIKEEKDAIV SSLLTVIRGS CDVVKSDTAH EGYSSASLAT NCYAMSSPSV AGGSREGSSS 180 SSVSPVVLPA PDDMGLGLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 2e-18 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG055730.1 |