PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG051840.11 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 114aa MW: 12697.4 Da PI: 4.7629 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 24.7 | 4.1e-08 | 73 | 97 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +ktelC+ + G C+ G+rC+FaHg TRIDC3BG051840.11 73 QKTELCNKWEG-GACSCGGRCRFAHG 97 69*******98.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MDFFRILENA FSVWFRLNCC PTVPAQPPNV LCLGRAFFQL LYWFSLHTDQ AGVDEAKGDG 60 EVVELEAYRQ GTQKTELCNK WEGGACSCGG RCRFAHGLQD DGFLISLTNQ GVQG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66810.1 | 8e-14 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG051840.11 |