PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG051330.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 235aa MW: 25171.3 Da PI: 7.0727 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 116.7 | 1.5e-36 | 43 | 147 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 +C aCk+lrr+C+++Cv+ap+f ++ +++fa+vh++FGasnv kll+++p r+d++++++yeA+ar+ dPvyG+vg+il+lq+q++ TRIDC3BG051330.2 43 PCGACKFLRRRCVPGCVFAPHFsgsgRERGAAQFAAVHRVFGASNVAKLLSRVPVALRRDTARTVCYEAQARIADPVYGCVGTILALQHQVAL 135 7*********************766333448************************************************************** PP DUF260 90 lkaelallkeel 101 l+ +l++l+++l TRIDC3BG051330.2 136 LQGQLSVLQTQL 147 ******999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MQEEPAPPRK RGGAVHGSAA REQQQQQQQQ ADEASSAAGP GAPCGACKFL RRRCVPGCVF 60 APHFSGSGRE RGAAQFAAVH RVFGASNVAK LLSRVPVALR RDTARTVCYE AQARIADPVY 120 GCVGTILALQ HQVALLQGQL SVLQTQLFNC RLALASTHPD SAEQLALLQP AYSAASAPSQ 180 MVNYDDLPQA VDFMDVEPQM RGLESLQLSQ PPHRDEDESQ GVSPFSDNAG GQRQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03760.1 | 3e-47 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG051330.2 |