PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG049970.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 602aa MW: 65301.6 Da PI: 9.0381

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG049970.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41.2	3.2e-13	154	193	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk CnC++skClk+YCeCfa+g +C+ C+C++C+N+ e+ TRIDC3BG049970.7 154 KKKCCNCRHSKCLKLYCECFASGIYCDG-CNCTNCFNNVEN 193 799***********************.******9875 PP
2	TCR	50.9	3.1e-16	238	276	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN TRIDC3BG049970.7 238 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNF 276 589***********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
QAGAGAGGAG SGPLPRVPVP AVSTQPPIKK LVRQLDFNYG NPAMAAAAAA ASRTVQPRAL 60 QVGYPQPHQL RAALPMGVPH QLQPRGLPVM RPHQMVHAPL PRPALPMAMP VPVPQARSAL 120 PQPVQRPPVA VPLKPESPKP RGRLYDGKDG TPTKKKCCNC RHSKCLKLYC ECFASGIYCD 180 GCNCTNCFNN VENEVARREA IEATLERNPD AFRPKIGSSP HTNRNNMEVA GDLPLIGKHN 240 KGCHCKKSGC LKKYCECFQA NILCSENCKC MDCKNFDGSE DRKHLNFDHK NVIHMQQAAN 300 AAVNGAIGAT ALSSPSTSRK RKHIDSSLDL STKEHLAIRN GQLSQKNAMA SDGSFPIGQS 360 AHPHMMGPFK VTYRPLLADI IQPGDVKELC KLLVTVSGQA AKAYTGSRKI QEEKVAEKED 420 GVGGSLALTN HDREGKSKDQ NHRKISIDDH SSGGTDMGKA SLDDSRPDCT DDQKSSRPMS 480 PGTLALMCDE QDAMFATSQN AVAPSAIDVD QNRSELYAEQ ERCVLTEFRD CLRKLVQYGR 540 MKEEKYSMAI RSEVTGHPGQ VNGALRIPYP KVDVPVVKTF PQSSSKHLVA GNTSSGHLDK 600 RL

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

QAGAGAGGAG SGPLPRVPVP AVSTQPPIKK LVRQLDFNYG NPAMAAAAAA ASRTVQPRAL  60
QVGYPQPHQL RAALPMGVPH QLQPRGLPVM RPHQMVHAPL PRPALPMAMP VPVPQARSAL  120
PQPVQRPPVA VPLKPESPKP RGRLYDGKDG TPTKKKCCNC RHSKCLKLYC ECFASGIYCD  180
GCNCTNCFNN VENEVARREA IEATLERNPD AFRPKIGSSP HTNRNNMEVA GDLPLIGKHN  240
KGCHCKKSGC LKKYCECFQA NILCSENCKC MDCKNFDGSE DRKHLNFDHK NVIHMQQAAN  300
AAVNGAIGAT ALSSPSTSRK RKHIDSSLDL STKEHLAIRN GQLSQKNAMA SDGSFPIGQS  360
AHPHMMGPFK VTYRPLLADI IQPGDVKELC KLLVTVSGQA AKAYTGSRKI QEEKVAEKED  420
GVGGSLALTN HDREGKSKDQ NHRKISIDDH SSGGTDMGKA SLDDSRPDCT DDQKSSRPMS  480
PGTLALMCDE QDAMFATSQN AVAPSAIDVD QNRSELYAEQ ERCVLTEFRD CLRKLVQYGR  540
MKEEKYSMAI RSEVTGHPGQ VNGALRIPYP KVDVPVVKTF PQSSSKHLVA GNTSSGHLDK  600
RL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-124	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG049970.7